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用于PCR检测的粪便样本快速有效制备方法。

Rapid and effective method for preparation of fecal specimens for PCR assays.

作者信息

Lou Q, Chong S K, Fitzgerald J F, Siders J A, Allen S D, Lee C H

机构信息

Department of Pediatrics, Indiana University School of Medicine, Indianapolis 46202, USA.

出版信息

J Clin Microbiol. 1997 Jan;35(1):281-3. doi: 10.1128/jcm.35.1.281-283.1997.

DOI:10.1128/jcm.35.1.281-283.1997
PMID:8968926
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC229557/
Abstract

We have developed a novel method for the preparation of fecal specimens for PCR assays. Approximately 100 mg of solid stool or 200 microliters of liquid fecal sample was thoroughly suspended in 1 ml of water. Fecal debris was removed by low-speed centrifugation (2,800 x g for 2 min). The supernatant was then boiled for 10 min in a water bath and further clarified by high-speed centrifugation (12,000 x g for 5 min). Fifty microliters of the clarified supernatant was then purified by Sepharose CL-6B spin column chromatography, and a portion of the purified supernatant was used for PCR. By this method, stools containing enterotoxigenic Escherichia coli H10407 were amplified by colonization factor antigen I fimbrial gene PCR, with a sensitivity of 100 organisms per reaction. The method was also effective for processing stool specimens for Clostridium difficile toxin A and B gene PCRs. This method is rapid, effective, and simple to perform and will improve the applications of PCR to stool specimens for diagnostic purposes.

摘要

我们开发了一种用于制备粪便标本以进行PCR检测的新方法。将约100mg固体粪便或200微升液体粪便样本充分悬浮于1ml水中。通过低速离心(2800×g,2分钟)去除粪便残渣。然后将上清液在水浴中煮沸10分钟,并通过高速离心(12000×g,5分钟)进一步澄清。接着,取50微升澄清的上清液通过Sepharose CL - 6B旋转柱色谱法进行纯化,纯化后的上清液一部分用于PCR。通过这种方法,含有产肠毒素大肠杆菌H10407的粪便经定居因子抗原I菌毛基因PCR扩增,每个反应的灵敏度为100个菌。该方法对处理用于艰难梭菌毒素A和B基因PCR的粪便标本也有效。此方法快速、有效且操作简单,将改善PCR在粪便标本诊断应用中的效果。

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