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Quantum efficiency of the photochemical cycle of bacteriorhodopsin.菌紫质光化学循环的量子效率。
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Protein catalysis of the retinal subpicosecond photoisomerization in the primary process of bacteriorhodopsin photosynthesis.蛋白催化视黄醛亚皮秒光异构化在细菌视紫红质光合作用的最初过程中。
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Molecular dynamics study of early picosecond events in the bacteriorhodopsin photocycle: dielectric response, vibrational cooling and the J, K intermediates.细菌视紫红质光循环中皮秒早期事件的分子动力学研究:介电响应、振动冷却及J、K中间体
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Replacement effects of neutral amino acid residues of different molecular volumes in the retinal binding cavity of bacteriorhodopsin on the dynamics of its primary process.细菌视紫红质视网膜结合腔中不同分子体积的中性氨基酸残基对其初级过程动力学的替代效应。
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Attachment site(s) of retinal in bacteriorhodopsin.细菌视紫红质中视网膜的附着位点。
Proc Natl Acad Sci U S A. 1981 Jul;78(7):4068-72. doi: 10.1073/pnas.78.7.4068.
6
Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: evidence for a distorted 13-cis retinal chromophore.细菌视紫红质初级光产物的共振拉曼光谱:13-顺式视黄醛发色团扭曲的证据。
Proc Natl Acad Sci U S A. 1982 Jan;79(2):403-7. doi: 10.1073/pnas.79.2.403.
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Rhodopsin-like protein from the purple membrane of Halobacterium halobium.来自嗜盐栖热菌紫膜的视紫红质样蛋白。
Nat New Biol. 1971 Sep 29;233(39):149-52. doi: 10.1038/newbio233149a0.
8
Tunable laser resonance raman spectroscopy of bacteriorhodopsin.细菌视紫红质的可调谐激光共振拉曼光谱
Proc Natl Acad Sci U S A. 1974 Nov;71(11):4462-6. doi: 10.1073/pnas.71.11.4462.
9
Reconstitution of purple membrane vesicles catalyzing light-driven proton uptake and adenosine triphosphate formation.催化光驱动质子摄取和三磷酸腺苷形成的紫膜囊泡的重构。
J Biol Chem. 1974 Jan 25;249(2):662-3.
10
Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin.细菌视紫红质中飞秒激发态顺反异构化的直接观测。
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细菌视紫红质中视黄醛的光异构化:三态模型的实验证据。

The photoisomerization of retinal in bacteriorhodospin: experimental evidence for a three-state model.

作者信息

Hasson K C, Gai F, Anfinrud P A

机构信息

Department of Physics, Harvard University, Cambridge, MA 02138, USA.

出版信息

Proc Natl Acad Sci U S A. 1996 Dec 24;93(26):15124-9. doi: 10.1073/pnas.93.26.15124.

DOI:10.1073/pnas.93.26.15124
PMID:8986774
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC26367/
Abstract

The primary events in the all-trans to 13-cis photoisomerization of retinal in bacteriorhodopsin have been investigated with femtosecond time-resolved absorbance spectroscopy. Spectra measured over a broad range extending from 7000 to 22,400 cm-1 reveal features whose dynamics are inconsistent with a model proposed earlier to account for the highly efficient photoisomerization process. Emerging from this work is a new three-state model. Photoexcitation of retinal with visible light accesses a shallow well on the excited state potential energy surface. This well is bounded by a small barrier, arising from an avoided crossing that separates the Franck-Condon region from the nearby reactive region of the photoisomerization coordinate. At ambient temperatures, the reactive region is accessed with a time constant of approximately 500 fs, whereupon the retinal rapidly twists and encounters a second avoided crossing region. The protein mediates the passage into the second avoided crossing region and thereby exerts control over the quantum yield for forming 13-cis retinal. The driving force for photoisomerization resides in the retinal, not in the surrounding protein. This view contrasts with an earlier model where photoexcitation was thought to access directly a reactive region of the excited-state potential and thereby drive the retinal to a twisted conformation within 100-200 fs.

摘要

利用飞秒时间分辨吸收光谱研究了细菌视紫红质中视黄醛全反式到13-顺式光异构化的主要过程。在7000至22400 cm-1的宽范围内测量的光谱揭示了一些特征,其动力学与先前提出的用于解释高效光异构化过程的模型不一致。这项工作中出现了一个新的三态模型。用可见光对视黄醛进行光激发会进入激发态势能面上的一个浅阱。这个阱由一个小势垒界定,该势垒源于一个避免交叉,它将弗兰克-康登区域与光异构化坐标附近的反应区域分隔开。在环境温度下,以大约500 fs的时间常数进入反应区域,随后视黄醛迅速扭转并遇到第二个避免交叉区域。蛋白质介导进入第二个避免交叉区域,从而控制形成13-顺式视黄醛的量子产率。光异构化的驱动力存在于视黄醛中,而非周围的蛋白质中。这一观点与早期模型形成对比,早期模型认为光激发直接进入激发态势能的反应区域,从而在100 - 200 fs内将视黄醛驱动到扭曲构象。