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1
Cryptic single-stranded-DNA binding activities of the phage lambda P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA.噬菌体λ P蛋白和大肠杆菌DnaC复制起始蛋白的隐蔽性单链DNA结合活性促进了大肠杆菌DnaB解旋酶与DNA的结合。
Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1154-9. doi: 10.1073/pnas.94.4.1154.
2
Host virus interactions in the initiation of bacteriophage lambda DNA replication. Recruitment of Escherichia coli DnaB helicase by lambda P replication protein.噬菌体λ DNA复制起始过程中的宿主-病毒相互作用。λ P复制蛋白对大肠杆菌DnaB解旋酶的招募。
J Biol Chem. 1990 Aug 5;265(22):13297-307.
3
Quantitative analysis of binding of single-stranded DNA by Escherichia coli DnaB helicase and the DnaB x DnaC complex.大肠杆菌DnaB解旋酶及DnaB x DnaC复合物与单链DNA结合的定量分析。
Biochemistry. 2006 Sep 26;45(38):11505-13. doi: 10.1021/bi060118d.
4
Interactions of the Escherichia coli DnaB helicase hexamer with the replication factor the DnaC protein. Effect of nucleotide cofactors and the ssDNA on protein-protein interactions and the topology of the complex.大肠杆菌DnaB解旋酶六聚体与复制因子DnaC蛋白的相互作用。核苷酸辅因子和单链DNA对蛋白质-蛋白质相互作用及复合物拓扑结构的影响。
J Mol Biol. 2003 Jun 6;329(3):441-65. doi: 10.1016/s0022-2836(03)00435-2.
5
Overexpression of the Replicative Helicase in Escherichia coli Inhibits Replication Initiation and Replication Fork Reloading.大肠杆菌中复制解旋酶的过表达抑制复制起始和复制叉重新加载。
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6
The requirement for molecular chaperones in lambda DNA replication is reduced by the mutation pi in lambda P gene, which weakens the interaction between lambda P protein and DnaB helicase.λ P基因中的pi突变降低了λ DNA复制中对分子伴侣的需求,该突变减弱了λ P蛋白与DnaB解旋酶之间的相互作用。
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7
The DnaC helicase loader is a dual ATP/ADP switch protein.DnaC解旋酶装载蛋白是一种双ATP/ADP开关蛋白。
EMBO J. 2002 Jun 17;21(12):3148-59. doi: 10.1093/emboj/cdf308.
8
Quantitative analysis of nucleotide modulation of DNA binding by DnaC protein of Escherichia coli.大肠杆菌DnaC蛋白对DNA结合的核苷酸调节的定量分析。
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Activity of the Hsp70 chaperone complex--DnaK, DnaJ, and GrpE--in initiating phage lambda DNA replication by sequestering and releasing lambda P protein.热休克蛋白70伴侣复合体(DnaK、DnaJ和GrpE)通过隔离和释放λ P蛋白启动噬菌体λ DNA复制的活性。
Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):12108-11. doi: 10.1073/pnas.89.24.12108.
10
Biochemical characterization of Escherichia coli DnaC variants that alter DnaB helicase loading onto DNA.大肠杆菌 DnaC 变体的生化特性改变了 DnaB 解旋酶在 DNA 上的加载。
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Convergent evolution in two bacterial replicative helicase loaders.两种细菌复制解旋酶加载器的趋同进化。
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Genomic Characterisation of UFJF_PfDIW6: A Novel Lytic -Phage with Potential for Biocontrol in the Dairy Industry.UFJF_PfDIW6 的基因组特征:一种新型溶菌噬菌体,有望在乳品行业中进行生物防治。
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Formation of Complexes Between O Proteins and Replication Origin Regions of Shiga Toxin-Converting Bacteriophages.志贺毒素转换噬菌体的O蛋白与复制起始区域之间复合物的形成
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8
Lambda gpP-DnaB Helicase Sequestration and gpP-RpoB Associated Effects: On Screens for Auxotrophs, Selection for Rif(R), Toxicity, Mutagenicity, Plasmid Curing.λ gpP-DnaB解旋酶隔离及gpP-RpoB相关效应:在营养缺陷型筛选、利福平抗性(Rif(R))选择、毒性、诱变性、质粒消除方面的研究
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Viral hijacking of a replicative helicase loader and its implications for helicase loading control and phage replication.病毒对复制性解旋酶装载蛋白的劫持及其对解旋酶装载控制和噬菌体复制的影响。
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本文引用的文献

1
The hexameric E. coli DnaB helicase can exist in different Quaternary states.六聚体大肠杆菌DnaB解旋酶可以以不同的四级结构状态存在。
J Mol Biol. 1996 May 31;259(1):7-14. doi: 10.1006/jmbi.1996.0297.
2
A bipartite signaling mechanism involved in DnaJ-mediated activation of the Escherichia coli DnaK protein.一种参与DnaJ介导的大肠杆菌DnaK蛋白激活的双组分信号传导机制。
J Biol Chem. 1996 May 10;271(19):11236-46. doi: 10.1074/jbc.271.19.11236.
3
The structure of the initiation complex at the replication origin, oriC, of Escherichia coli.大肠杆菌复制起点oriC处起始复合物的结构。
Nucleic Acids Res. 1993 Nov 11;21(22):5025-33. doi: 10.1093/nar/21.22.5025.
4
DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli.在大肠杆菌DNA复制起始过程中,DnaA蛋白指导DnaB蛋白的结合。
J Biol Chem. 1994 Feb 18;269(7):4883-90.
5
Modulation of the ATPase activity of the molecular chaperone DnaK by peptides and the DnaJ and GrpE heat shock proteins.肽以及DnaJ和GrpE热休克蛋白对分子伴侣DnaK的ATP酶活性的调节作用。
J Biol Chem. 1995 Mar 3;270(9):4563-9. doi: 10.1074/jbc.270.9.4563.
6
A structural model for the Escherichia coli DnaB helicase based on electron microscopy data.基于电子显微镜数据构建的大肠杆菌DnaB解旋酶结构模型。
J Struct Biol. 1995 May-Jun;114(3):167-76. doi: 10.1006/jsbi.1995.1016.
7
Interactions of Escherichia coli primary replicative helicase DnaB protein with single-stranded DNA. The nucleic acid does not wrap around the protein hexamer.大肠杆菌主要复制解旋酶DnaB蛋白与单链DNA的相互作用。核酸不会缠绕在蛋白质六聚体周围。
Biochemistry. 1995 Jul 11;34(27):8513-9. doi: 10.1021/bi00027a001.
8
DnaA-dependent assembly of the ABC primosome at the A site, a single-stranded DNA hairpin containing a dnaA box.DNA A 依赖的 ABC 引发体在 A 位点的组装,A 位点是一个含有 dnaA 框的单链 DNA 发夹结构。
Eur J Biochem. 1995 Jun 1;230(2):384-95. doi: 10.1111/j.1432-1033.1995.tb20573.x.
9
The bacteriophage lambda O and P protein initiators promote the replication of single-stranded DNA.噬菌体λ O和P蛋白引发剂促进单链DNA的复制。
Nucleic Acids Res. 1984 Apr 11;12(7):3069-88. doi: 10.1093/nar/12.7.3069.
10
The bacteriophage lambda O replication protein: isolation and characterization of the amplified initiator.噬菌体λO复制蛋白:扩增启动子的分离与鉴定
Nucleic Acids Res. 1983 Nov 11;11(21):7435-52.

噬菌体λ P蛋白和大肠杆菌DnaC复制起始蛋白的隐蔽性单链DNA结合活性促进了大肠杆菌DnaB解旋酶与DNA的结合。

Cryptic single-stranded-DNA binding activities of the phage lambda P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA.

作者信息

Learn B A, Um S J, Huang L, McMacken R

机构信息

Department of Biochemistry, School of Hygiene and Public Health, Johns Hopkins University, Baltimore, MD 21205, USA.

出版信息

Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1154-9. doi: 10.1073/pnas.94.4.1154.

DOI:10.1073/pnas.94.4.1154
PMID:9037022
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC19760/
Abstract

The bacteriophage lambda P and Escherichia coli DnaC proteins are known to recruit the bacterial DnaB replicative helicase to initiator complexes assembled at the phage and bacterial origins, respectively. These specialized nucleoprotein assemblies facilitate the transfer of one or more molecules of DnaB helicase onto the chromosome; the transferred DnaB, in turn, promotes establishment of a processive replication fork apparatus. To learn more about the mechanism of the DnaB transfer reaction, we investigated the interaction of replication initiation proteins with single-stranded DNA (ssDNA). These studies indicate that both P and DnaC contain a cryptic ssDNA-binding activity that is mobilized when each forms a complex with the DnaB helicase. Concomitantly, the capacity of DnaB to bind to ssDNA, as judged by UV-crosslinking analysis, is suppressed upon formation of a P x DnaB or a DnaB x DnaC complex. This novel switch in ssDNA-binding activity evoked by complex formation suggests that interactions of P or DnaC with ssDNA may precede the transfer of DnaB onto DNA during initiation of DNA replication. Further, we find that the lambda O replication initiator enhances interaction of the P x DnaB complex with ssDNA. Partial disassembly of a ssDNA:O x P x DnaB complex by the DnaK/DnaJ/GrpE molecular chaperone system results in the transfer in cis of DnaB to the ssDNA template. On the basis of these findings, we present a general model for the transfer of DnaB onto ssDNA or onto chromosomal origins by replication initiation proteins.

摘要

已知噬菌体λ P蛋白和大肠杆菌DnaC蛋白分别将细菌DnaB复制解旋酶招募到在噬菌体和细菌起源处组装的起始复合物上。这些特殊的核蛋白组装促进了一个或多个DnaB解旋酶分子转移到染色体上;转移的DnaB反过来促进了连续复制叉装置的建立。为了更多地了解DnaB转移反应的机制,我们研究了复制起始蛋白与单链DNA(ssDNA)的相互作用。这些研究表明,P蛋白和DnaC蛋白都具有一种隐藏的ssDNA结合活性,当它们各自与DnaB解旋酶形成复合物时,这种活性就会被激活。同时,通过紫外线交联分析判断,当形成P×DnaB或DnaB×DnaC复合物时,DnaB与ssDNA结合的能力会受到抑制。复合物形成引发的这种ssDNA结合活性的新转变表明,在DNA复制起始过程中,P蛋白或DnaC蛋白与ssDNA的相互作用可能先于DnaB转移到DNA上。此外,我们发现λ O复制起始蛋白增强了P×DnaB复合物与ssDNA的相互作用。DnaK/DnaJ/GrpE分子伴侣系统对ssDNA:O×P×DnaB复合物的部分拆解导致DnaB顺式转移到ssDNA模板上。基于这些发现,我们提出了一个关于复制起始蛋白将DnaB转移到ssDNA或染色体起源上的通用模型。