Department of Chemistry and Biochemistry, City College of New York, New York, United States.
PhD Program in Biochemistry, The Graduate Center of the City University of New York, New York, United States.
Elife. 2018 Dec 24;7:e41140. doi: 10.7554/eLife.41140.
Assembly of bacterial ring-shaped hexameric replicative helicases on single-stranded (ss) DNA requires specialized loading factors. However, mechanisms implemented by these factors during opening and closing of the helicase, which enable and restrict access to an internal chamber, are not known. Here, we investigate these mechanisms in the DnaB helicase•bacteriophage λ helicase loader (λP) complex. We show that five copies of λP bind at DnaB subunit interfaces and reconfigure the helicase into an open spiral conformation that is intermediate to previously observed closed ring and closed spiral forms; reconfiguration also produces openings large enough to admit ssDNA into the inner chamber. The helicase is also observed in a restrained inactive configuration that poises it to close on activating signal, and transition to the translocation state. Our findings provide insights into helicase opening, delivery to the origin and ssDNA entry, and closing in preparation for translocation.
细菌环形六聚体复制解旋酶在单链 (ss) DNA 上的组装需要专门的加载因子。然而,这些因子在解旋酶的开启和关闭过程中所实施的机制,即允许和限制进入内部腔室的机制尚不清楚。在这里,我们研究了 DnaB 解旋酶-噬菌体 λ 解旋酶加载器(λP)复合物中的这些机制。我们表明,五个 λP 拷贝结合在 DnaB 亚基界面上,并将解旋酶重组成一种开放的螺旋构象,这种构象介于先前观察到的封闭环和封闭螺旋形式之间;重组成也产生了足够大的开口,以便将 ssDNA 导入内腔。该解旋酶还观察到一种受限制的非活性构象,使它能够在激活信号的作用下关闭,并转变为易位状态。我们的发现提供了对解旋酶开启、递送至起始点和 ssDNA 进入以及关闭以准备易位的深入了解。