• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

结合、封装与排出:伴侣蛋白辅助折叠反应过程中的底物动力学

Binding, encapsulation and ejection: substrate dynamics during a chaperonin-assisted folding reaction.

作者信息

Ranson N A, Burston S G, Clarke A R

机构信息

Molecular Recognition Centre, School of Medical Sciences, University of Bristol, UK.

出版信息

J Mol Biol. 1997 Mar 7;266(4):656-64. doi: 10.1006/jmbi.1996.0815.

DOI:10.1006/jmbi.1996.0815
PMID:9102459
Abstract

Mitochondrial malate dehydrogenase (mMDH) folds more rapidly in the presence of GroEL, GroES and ATP than it does unassisted. The increase in folding rate as a function of the concentration of GroEL-ES reaches a maximum at a stoichiometry which is approximately equimolar (mMDH subunits:GroEL oligomer) and with an apparent dissociation constant K' for the GroE acceptor state of at least 1 x 10(-8) M. However, even at chaperonin concentrations which are 4000 x K', i.e. at negligible concentrations of free mMDH, the observed folding rate of the substrate remains at its optimum, showing not only that folding occurs in the chaperonin-mMDH complex but also that this rate is uninhibited by any interactions with sites on GroEL. Despite the ability of mMDH to fold on the chaperonin, trapping experiments show that its dwell time on the complex is only 20 seconds. This correlates with both the rate of ATP turnover and the dwell time of GroES on the complex and is only approximately 5% of the time taken for the substrate to commit to the folded state. The results imply that ATP drives the chaperonin complex through a cycle of three functional states: (1) an acceptor complex in which the unfolded substrate is bound tightly; (2) an encapsulation state in which it is sequestered but direct protein-protein contact is lost so that folding can proceed unhindered; and (3) an ejector state which forces dissociation of the substrate whether folded or not.

摘要

线粒体苹果酸脱氢酶(mMDH)在存在GroEL、GroES和ATP的情况下比无辅助时折叠得更快。折叠速率随GroEL-ES浓度的增加在大约等摩尔的化学计量比(mMDH亚基:GroEL寡聚体)时达到最大值,并且GroE受体状态的表观解离常数K'至少为1×10⁻⁸ M。然而,即使在伴侣蛋白浓度为4000×K'时,即游离mMDH浓度可忽略不计的情况下,观察到的底物折叠速率仍保持在最佳状态,这不仅表明折叠发生在伴侣蛋白-mMDH复合物中,而且该速率不受与GroEL上位点的任何相互作用的抑制。尽管mMDH能够在伴侣蛋白上折叠,但捕获实验表明其在复合物上的停留时间仅为20秒。这与ATP周转速率以及GroES在复合物上的停留时间相关,并且仅约为底物进入折叠状态所需时间的5%。结果表明,ATP驱动伴侣蛋白复合物经历三个功能状态的循环:(1)一种受体复合物,其中未折叠的底物紧密结合;(2)一种封装状态,其中底物被隔离但失去了直接的蛋白质-蛋白质接触,从而使折叠能够不受阻碍地进行;(3)一种排出状态,它迫使底物解离,无论其是否已折叠。

相似文献

1
Binding, encapsulation and ejection: substrate dynamics during a chaperonin-assisted folding reaction.结合、封装与排出:伴侣蛋白辅助折叠反应过程中的底物动力学
J Mol Biol. 1997 Mar 7;266(4):656-64. doi: 10.1006/jmbi.1996.0815.
2
On the role of symmetrical and asymmetrical chaperonin complexes in assisted protein folding.关于对称和不对称伴侣蛋白复合物在辅助蛋白质折叠中的作用
Biol Chem. 1999 May;380(5):531-40. doi: 10.1515/BC.1999.068.
3
Coupling between protein folding and allostery in the GroE chaperonin system.GroE伴侣蛋白系统中蛋白质折叠与变构之间的偶联。
Proc Natl Acad Sci U S A. 2000 Feb 15;97(4):1521-4. doi: 10.1073/pnas.040449997.
4
Folding of malate dehydrogenase inside the GroEL-GroES cavity.苹果酸脱氢酶在GroEL-GroES腔内的折叠。
Nat Struct Biol. 2001 Aug;8(8):721-8. doi: 10.1038/90443.
5
Assay of malate dehydrogenase. A substrate for the E. coli chaperonins GroEL and GroES.苹果酸脱氢酶测定。大肠杆菌伴侣蛋白GroEL和GroES的一种底物。
Methods Mol Biol. 2000;140:127-32. doi: 10.1385/1-59259-061-6:127.
6
GroE chaperonin-assisted folding and assembly of dodecameric glutamine synthetase.GroE伴侣蛋白辅助十二聚体谷氨酰胺合成酶的折叠与组装。
Biochemistry (Mosc). 1998 Apr;63(4):382-98.
7
Exploring the kinetic requirements for enhancement of protein folding rates in the GroEL cavity.探索GroEL腔内提高蛋白质折叠速率的动力学要求。
J Mol Biol. 1999 Apr 2;287(3):627-44. doi: 10.1006/jmbi.1999.2591.
8
Asymmetry, commitment and inhibition in the GroE ATPase cycle impose alternating functions on the two GroEL rings.GroE ATP酶循环中的不对称性、协调性和抑制作用使两个GroEL环具有交替功能。
J Mol Biol. 1998 Apr 24;278(1):267-78. doi: 10.1006/jmbi.1998.1704.
9
The reaction cycle of GroEL and GroES in chaperonin-assisted protein folding.伴侣蛋白辅助蛋白质折叠过程中GroEL和GroES的反应循环。
Nature. 1993 Nov 18;366(6452):228-33. doi: 10.1038/366228a0.
10
Chaperonins can catalyse the reversal of early aggregation steps when a protein misfolds.当蛋白质错误折叠时,伴侣蛋白可以催化早期聚集步骤的逆转。
J Mol Biol. 1995 Jul 28;250(5):581-6. doi: 10.1006/jmbi.1995.0399.

引用本文的文献

1
Exploring Novel Antibiotics by Targeting the GroEL/GroES Chaperonin System.通过靶向GroEL/GroES伴侣蛋白系统探索新型抗生素
ACS Pharmacol Transl Sci. 2024 Dec 11;8(1):10-20. doi: 10.1021/acsptsci.4c00397. eCollection 2025 Jan 10.
2
Pushing the Envelope: The Mysterious Journey Through the Bacterial Secretory Machinery, and Beyond.突破极限:穿越细菌分泌机制及其他领域的神秘之旅
Front Microbiol. 2021 Nov 30;12:782900. doi: 10.3389/fmicb.2021.782900. eCollection 2021.
3
The Dynamic ATP-Driven Mechanism of Bacterial Protein Translocation and the Critical Role of Phospholipids.
细菌蛋白质转运的动态ATP驱动机制及磷脂的关键作用
Front Microbiol. 2019 Jun 19;10:1217. doi: 10.3389/fmicb.2019.01217. eCollection 2019.
4
Chaperones GroEL/GroES accelerate the refolding of a multidomain protein through modulating on-pathway intermediates.伴侣蛋白 GroEL/GroES 通过调节折叠途径中间产物加速多结构域蛋白的复性。
J Biol Chem. 2014 Jan 3;289(1):286-98. doi: 10.1074/jbc.M113.518373. Epub 2013 Nov 18.
5
Quantifying chaperone-mediated transitions in the proteostasis network of E. coli.定量大肠杆菌蛋白质稳态网络中的伴侣介导的转变。
PLoS Comput Biol. 2013;9(11):e1003324. doi: 10.1371/journal.pcbi.1003324. Epub 2013 Nov 14.
6
FoldEco: a model for proteostasis in E. coli.FoldEco:大肠杆菌中蛋白质平衡的模型。
Cell Rep. 2012 Mar 29;1(3):265-76. doi: 10.1016/j.celrep.2012.02.011.
7
Stimulating the substrate folding activity of a single ring GroEL variant by modulating the cochaperonin GroES.通过调节共伴侣蛋白 GroES 来刺激单个环 GroEL 变体的底物折叠活性。
J Biol Chem. 2011 Sep 2;286(35):30401-30408. doi: 10.1074/jbc.M111.255935. Epub 2011 Jul 10.
8
Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.晶体结构的 II 组伴侣蛋白揭示了与蛋白质折叠周期相关的开放和闭合状态。
J Biol Chem. 2010 Sep 3;285(36):27958-66. doi: 10.1074/jbc.M110.125344. Epub 2010 Jun 23.
9
ATP-triggered ADP release from the asymmetric chaperonin GroEL/GroES/ADP7 is not the rate-limiting step of the GroEL/GroES reaction cycle.ATP 触发不对称伴侣蛋白 GroEL/GroES/ADP7 释放 ADP 并不是 GroEL/GroES 反应循环的限速步骤。
FEBS Lett. 2010 Mar 5;584(5):951-3. doi: 10.1016/j.febslet.2010.01.021. Epub 2010 Jan 17.
10
GroEL/GroES cycling: ATP binds to an open ring before substrate protein favoring protein binding and production of the native state.GroEL/GroES 环循环:ATP 在底物蛋白有利于蛋白结合并产生天然状态之前与开放环结合。
Proc Natl Acad Sci U S A. 2009 Dec 1;106(48):20264-9. doi: 10.1073/pnas.0911556106. Epub 2009 Nov 13.