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酿酒酵母七号染色体右臂23,002碱基对DNA片段的DNA序列分析

DNA sequence analysis of a 23,002 bp DNA fragment of the right arm of Saccharomyces cerevisiae chromosome VII.

作者信息

Arroyo J, García-Gonzalez M, García-Saez M I, Sanchez M, Nombela C

机构信息

Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense, Madrid, Spain.

出版信息

Yeast. 1997 Mar 30;13(4):357-63. doi: 10.1002/(SICI)1097-0061(19970330)13:4<357::AID-YEA77>3.0.CO;2-J.

Abstract

We report the sequence of a 23,002 bp fragment located on the right arm of Saccharomyces cerevisiae chromosome VII. Analysis of this region revealed 14 complete open reading frames (ORFs) wit more than 300 base pairs. Six of them correspond to previously known genes. G7164 is the QCR9 gene coding for subunit 9 of the cytochrome c reductase; G7168 is UBR1, encoding an ubiquitin protein ligase; G7522 is the TYS1 gene, which encodes for the tyrosyl tRNA synthetase; G7526 is TFG1, the gene coding for the RNA polymerase transcription initiation factor TFIIF (factor G); G7538 is the gene HGH1 which encodes a protein related to the mammalian HMG1 and HMG2 proteins. G7542 is the BUB1 gene which encodes a ser/thr protein kinase involved in spindle assembly during the cell cycle. One of the ORFs, G7553, shares significant homologies with the gene UTR2 from S. cerevisiae. None of the seven remaining ORFs shows similarity to any of the sequences within the public databases. Three ORFs are internal ORFs of the above-described known genes, and two small ORFs are completely contained in larger ORFs on the complementary strand, and therefore probably do not correspond to real genes. This region also contains three genes specifying tRNAs for Leu, Lys and Trp, and several LTR elements.

摘要

我们报道了位于酿酒酵母七号染色体右臂上一个23002 bp片段的序列。对该区域的分析揭示了14个完整的开放阅读框(ORF),其长度超过300个碱基对。其中6个对应于先前已知的基因。G7164是编码细胞色素c还原酶亚基9的QCR9基因;G7168是UBR1,编码一种泛素蛋白连接酶;G7522是TYS1基因,其编码酪氨酰tRNA合成酶;G7526是TFG1,编码RNA聚合酶转录起始因子TFIIF(因子G)的基因;G7538是HGH1基因,其编码一种与哺乳动物HMG1和HMG2蛋白相关的蛋白质。G7542是BUB1基因,其编码一种参与细胞周期中纺锤体组装的丝氨酸/苏氨酸蛋白激酶。其中一个ORF,G7553,与酿酒酵母的UTR2基因具有显著的同源性。其余7个ORF中没有一个与公共数据库中的任何序列显示出相似性。3个ORF是上述已知基因的内部ORF,2个小ORF完全包含在互补链上较大的ORF中,因此可能不对应于真实的基因。该区域还包含3个分别指定亮氨酸、赖氨酸和色氨酸tRNA的基因,以及几个长末端重复元件。

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