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微管组装扩散限制速率的估计

Estimation of the diffusion-limited rate of microtubule assembly.

作者信息

Odde D J

机构信息

Department of Chemical Engineering, Michigan Technological University, Houghton 49931, USA.

出版信息

Biophys J. 1997 Jul;73(1):88-96. doi: 10.1016/S0006-3495(97)78050-0.

Abstract

Microtubule assembly is a complex process with individual microtubules alternating stochastically between extended periods of assembly and disassembly, a phenomenon known as dynamic instability. Since the discovery of dynamic instability, molecular models of assembly have generally assumed that tubulin incorporation into the microtubule lattice is primarily reaction-limited. Recently this assumption has been challenged and the importance of diffusion in microtubule assembly dynamics asserted on the basis of scaling arguments, with tubulin gradients predicted to extend over length scales exceeding a cell diameter, approximately 50 microns. To assess whether individual microtubules in vivo assemble at diffusion-limited rates and to predict the theoretical upper limit on the assembly rate, a steady-state mean-field model for the concentration of tubulin about a growing microtubule tip was developed. Using published parameter values for microtubule assembly in vivo (growth rate = 7 microns/min, diffusivity = 6 x 10(-12) m2/s, tubulin concentration = 10 microM), the model predicted that the tubulin concentration at the microtubule tip was approximately 89% of the concentration far from the tip, indicating that microtubule self-assembly is not diffusion-limited. Furthermore, the gradients extended less than approximately 50 nm (the equivalent of about two microtubule diameters) from the microtubule tip, a distance much less than a cell diameter. In addition, a general relation was developed to predict the diffusion-limited assembly rate from the diffusivity and bulk tubulin concentration. Using this relation, it was estimated that the maximum theoretical assembly rate is approximately 65 microns/min, above which tubulin can no longer diffuse rapidly enough to support faster growth.

摘要

微管组装是一个复杂的过程,单个微管在长时间的组装和拆卸之间随机交替,这种现象被称为动态不稳定性。自从发现动态不稳定性以来,组装的分子模型通常假定微管蛋白掺入微管晶格主要受反应限制。最近,这一假设受到了挑战,基于标度论证,扩散在微管组装动力学中的重要性得到了强调,预计微管蛋白梯度将延伸超过细胞直径(约50微米)的长度尺度。为了评估体内单个微管是否以扩散限制速率组装,并预测组装速率的理论上限,开发了一个关于生长微管尖端周围微管蛋白浓度的稳态平均场模型。利用已发表的体内微管组装参数值(生长速率 = 7微米/分钟,扩散率 = 6×10⁻¹²平方米/秒,微管蛋白浓度 = 10微摩尔),该模型预测微管尖端的微管蛋白浓度约为远离尖端处浓度的89%,表明微管自组装不受扩散限制。此外,梯度从微管尖端延伸的距离小于约50纳米(约相当于两个微管直径),这一距离远小于细胞直径。另外,还建立了一个通用关系,用于根据扩散率和微管蛋白总体浓度预测扩散限制组装速率。利用这个关系,估计最大理论组装速率约为65微米/分钟,超过这个速率,微管蛋白扩散速度将不足以支持更快的生长。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcaf/1180911/88a148c5ee89/biophysj00032-0099-a.jpg

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