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展示长随机肽的M13噬菌体文库的构建与筛选

Construction and screening of M13 phage libraries displaying long random peptides.

作者信息

McConnell S J, Uveges A J, Fowlkes D M, Spinella D G

机构信息

Cytogen Corporation, Princeton, NJ 08540-5237, USA.

出版信息

Mol Divers. 1996 May;1(3):165-76. doi: 10.1007/BF01544954.

DOI:10.1007/BF01544954
PMID:9237207
Abstract

We have constructed two phage display libraries expressing N-terminal pIII fusions in M13 composed of 37 and 43 random amino acid domains, respectively. The D38 library expresses 37 random amino acids with a central alanine residue, and the DC43 library contains 43 random amino acids with a central cysteine flanked by two glycine residues, giving the displayed peptide the potential to form disulfide loops of various sizes. We demonstrate that the majority of random sequences in both libraries are compatible in pentavalent display with phage viability. The M13 phage display vector itself has been engineered to contain a factor Xa protease cleavage site to provide an alternative to acid elution during affinity selection. An in-frame amber mutation has been inserted between the pIII cloning sites to allow for efficient selection against nonrecombinant phage in the library. These libraries have been panned against mAb 7E11-C5, which recognizes the prostate-specific membrane antigen (PSM). Isolated phage display a consensus sequence that is homologous to a region in the PSM molecule.

摘要

我们构建了两个噬菌体展示文库,分别在M13中表达由37个和43个随机氨基酸结构域组成的N端pIII融合蛋白。D38文库表达37个随机氨基酸,中间有一个丙氨酸残基;DC43文库包含43个随机氨基酸,中间有一个半胱氨酸,两侧各有一个甘氨酸残基,这使得展示的肽有可能形成各种大小的二硫键环。我们证明,两个文库中的大多数随机序列在五价展示中与噬菌体活力兼容。M13噬菌体展示载体本身经过改造,含有一个因子Xa蛋白酶切割位点,以便在亲和选择过程中提供一种替代酸洗脱的方法。在pIII克隆位点之间插入了一个框内琥珀突变,以有效筛选文库中的非重组噬菌体。这些文库已针对识别前列腺特异性膜抗原(PSM)的单克隆抗体7E11-C5进行淘选。分离出的噬菌体展示出与PSM分子中一个区域同源的共有序列。

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Construction and screening of M13 phage libraries displaying long random peptides.展示长随机肽的M13噬菌体文库的构建与筛选
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On the origin of non-specific binders isolated in the selection of phage display peptide libraries.关于在噬菌体展示肽库筛选中分离出的非特异性结合剂的起源
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本文引用的文献

1
An M13 phage library displaying random 38-amino-acid peptides as a source of novel sequences with affinity to selected targets.一个展示随机38个氨基酸肽的M13噬菌体文库,作为具有与选定靶标亲和力的新序列来源。
Gene. 1993 Jun 15;128(1):59-65. doi: 10.1016/0378-1119(93)90153-t.
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Molecular cloning of a complementary DNA encoding a prostate-specific membrane antigen.
Cancer Res. 1993 Jan 15;53(2):227-30.
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Folded proteins occur frequently in libraries of random amino acid sequences.折叠蛋白在随机氨基酸序列文库中频繁出现。
基于新一代测序技术的商业噬菌体展示肽库组成偏倚分析。
Viruses. 2022 Oct 29;14(11):2402. doi: 10.3390/v14112402.
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In vitro selection from protein and peptide libraries.从蛋白质和肽库中进行体外筛选。
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Gene. 1993 Jun 15;128(1):79-83. doi: 10.1016/0378-1119(93)90156-w.
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Comparison of plate versus liquid amplification of M13 phage display libraries.
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Tendamistat as a scaffold for conformationally constrained phage peptide libraries.
J Mol Biol. 1995 Jul 21;250(4):460-70. doi: 10.1006/jmbi.1995.0390.
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Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface.丝状融合噬菌体:在病毒粒子表面展示克隆抗原的新型表达载体。
Science. 1985 Jun 14;228(4705):1315-7. doi: 10.1126/science.4001944.
10
Monoclonal antibodies to a new antigenic marker in epithelial prostatic cells and serum of prostatic cancer patients.针对前列腺上皮细胞新抗原标志物及前列腺癌患者血清的单克隆抗体。
Anticancer Res. 1987 Sep-Oct;7(5B):927-35.