• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

嗜热四膜虫发育性扩增过程中正常、半合子和切除缺陷型rRNA基因的核内组织。

The intranuclear organization of normal, hemizygous and excision-deficient rRNA genes during developmental amplification in Tetrahymena thermophila.

作者信息

Ward J G, Blomberg P, Hoffman N, Yao M C

机构信息

Fred Hutchinson Cancer Research Center, Division of Basic Sciences, 1124 Columbia Street, Seattle, WA 98104, USA.

出版信息

Chromosoma. 1997 Sep;106(4):233-42. doi: 10.1007/s004120050244.

DOI:10.1007/s004120050244
PMID:9254725
Abstract

In the ciliated protozoan, Tetrahymena thermophila, the diploid germinal micronucleus contains two allelic copies of the gene for ribosomal RNA (rDNA). During genesis of new somatic macronuclei the germline rDNA gene is excised by developmentally programmed chromosome breakage and preferentially amplified to approximately 9, 000 copies. We have studied this process by fluorescence in situ hybridization. We find that initially rDNA amplification is restricted to two separate and highly confined regions of the nucleus. Analysis of nuclei that are hemizygous for the rDNA locus reveals that each focus of hybridization is derived from a single allele of the rDNA. As rDNA amplification progresses these two foci of hybridization disperse and spread throughout the macronucleus, eventually forming approximately 100-500 new nucleoli. These events are correlated with morphologically distinct developmental stages. We investigated the amplification of the C3 allele of the rDNA that confers a replication advantage over the B allele during vegetative propagation, and find no evidence for preferential amplification of the C3 early in rDNA maturation. We also show that the rmm 11 rDNA mutant allele, which is defective for developmentally programmed rDNA excision, can be amplified during the two-foci stage in mutant homozygotes and heterozygotes, but fails to amplify further and disperse into multiple nucleoli. These data indicate that amplification of the rmm 11 allele is not delayed during the initial rounds of amplification, and suggest that efficient excision is not required for this amplification to occur. We propose that rDNA amplification is a two-step process. First, the two rDNA alleles are independently amplified, while allelic copies remain closely associated. Later, copies of the rDNA disperse and are further amplified, presumably because rDNA excision has occurred, generating fully mature rDNA minichromosomes that are able to replicate to high copy number.

摘要

在纤毛原生动物嗜热四膜虫中,二倍体生殖微核包含核糖体RNA(rDNA)基因的两个等位基因拷贝。在新的体大核形成过程中,生殖系rDNA基因通过发育程序控制的染色体断裂被切除,并优先扩增至约9000个拷贝。我们通过荧光原位杂交研究了这一过程。我们发现,最初rDNA扩增局限于细胞核的两个独立且高度受限的区域。对rDNA基因座半合子的细胞核分析表明,每个杂交位点都来自rDNA的单个等位基因。随着rDNA扩增的进行,这两个杂交位点分散并扩散到整个大核中,最终形成约100 - 500个新的核仁。这些事件与形态上不同的发育阶段相关。我们研究了在营养繁殖期间赋予比B等位基因复制优势的rDNA的C3等位基因的扩增,发现在rDNA成熟早期没有优先扩增C3的证据。我们还表明,在发育程序控制的rDNA切除方面有缺陷的rmm 11 rDNA突变等位基因,在突变纯合子和杂合子的双位点阶段可以扩增,但无法进一步扩增并分散到多个核仁中。这些数据表明,rmm 11等位基因的扩增在最初几轮扩增中没有延迟,这表明这种扩增发生并不需要有效的切除。我们提出rDNA扩增是一个两步过程。首先,两个rDNA等位基因独立扩增,而等位基因拷贝保持紧密关联。后来,rDNA拷贝分散并进一步扩增,推测是因为rDNA切除已经发生,产生了能够复制到高拷贝数的完全成熟的rDNA小染色体。

相似文献

1
The intranuclear organization of normal, hemizygous and excision-deficient rRNA genes during developmental amplification in Tetrahymena thermophila.嗜热四膜虫发育性扩增过程中正常、半合子和切除缺陷型rRNA基因的核内组织。
Chromosoma. 1997 Sep;106(4):233-42. doi: 10.1007/s004120050244.
2
A weak germ-line excision mutation blocks developmentally controlled amplification of the rDNA minichromosome of Tetrahymena thermophila.一种弱的种系切除突变会阻断嗜热四膜虫rDNA微型染色体的发育控制扩增。
Genes Dev. 1994 Jan;8(1):84-95. doi: 10.1101/gad.8.1.84.
3
Deletion of the Tetrahymena thermophila rDNA replication fork barrier region disrupts macronuclear rDNA excision and creates a fragile site in the micronuclear genome.嗜热四膜虫核糖体DNA复制叉屏障区域的缺失会破坏大核核糖体DNA的切除,并在小核基因组中产生一个脆弱位点。
Nucleic Acids Res. 2006 Jan 30;34(2):620-34. doi: 10.1093/nar/gkj466. Print 2006.
4
Stochastic developmental variation in the ratio of allelic rDNAs among newly differentiated, heterozygous macronuclei of Tetrahymena thermophila.嗜热四膜虫新分化的杂合大核中等位基因rDNA比例的随机发育变异。
Dev Genet. 1992;13(1):87-93. doi: 10.1002/dvg.1020130114.
5
Regulatory sequences for the amplification and replication of the ribosomal DNA minichromosome in Tetrahymena thermophila.嗜热四膜虫核糖体DNA微型染色体扩增与复制的调控序列。
Mol Cell Biol. 1997 Dec;17(12):7237-47. doi: 10.1128/MCB.17.12.7237.
6
Tetrahymena thermophila mutants defective in the developmentally programmed maturation and maintenance of the rDNA minichromosome.嗜热四膜虫突变体在rDNA微型染色体的发育程序性成熟和维持方面存在缺陷。
Genetics. 1994 Jun;137(2):455-66. doi: 10.1093/genetics/137.2.455.
7
Allele-specific, selective amplification of a ribosomal RNA gene in Tetrahymena thermophila.嗜热四膜虫核糖体RNA基因的等位基因特异性选择性扩增。
Cell. 1982 Mar;28(3):595-604. doi: 10.1016/0092-8674(82)90214-8.
8
Accurate processing and amplification of cloned germ line copies of ribosomal DNA injected into developing nuclei of Tetrahymena thermophila.准确处理并扩增注射到嗜热四膜虫发育细胞核中的核糖体DNA克隆种系拷贝。
Mol Cell Biol. 1989 Mar;9(3):1092-9. doi: 10.1128/mcb.9.3.1092-1099.1989.
9
Developmentally regulated processing and replication of the Tetrahymena rDNA minichromosome.嗜热四膜虫rDNA微型染色体的发育调控加工与复制
Curr Opin Genet Dev. 1993 Oct;3(5):730-5. doi: 10.1016/s0959-437x(05)80091-7.
10
Developmental regulation of DNA replication: replication fork barriers and programmed gene amplification in Tetrahymena thermophila.DNA复制的发育调控:嗜热四膜虫中的复制叉障碍与程序性基因扩增
Mol Cell Biol. 1997 Oct;17(10):6147-56. doi: 10.1128/MCB.17.10.6147.

引用本文的文献

1
Programmed Genome Rearrangements in the Ciliate Oxytricha.纤毛虫 Oxytricha 中的程序性基因组重排。
Microbiol Spectr. 2014 Dec;2(6). doi: 10.1128/microbiolspec.MDNA3-0025-2014.
2
The highly conserved family of Tetrahymena thermophila chromosome breakage elements contains an invariant 10-base-pair core.嗜热四膜虫染色体断裂元件的高度保守家族包含一个不变的10个碱基对的核心。
Eukaryot Cell. 2006 Apr;5(4):771-80. doi: 10.1128/EC.5.4.771-780.2006.
3
Characterization of a novel origin recognition complex-like complex: implications for DNA recognition, cell cycle control, and locus-specific gene amplification.
一种新型类起始识别复合物的特性:对DNA识别、细胞周期调控及位点特异性基因扩增的意义
Mol Cell Biol. 2003 Jul;23(14):5005-17. doi: 10.1128/MCB.23.14.5005-5017.2003.
4
Development and application of a most-probable-number-pcr assay to quantify flagellate populations in soil samples.一种用于定量土壤样品中鞭毛虫种群的最大可能数聚合酶链反应检测方法的开发与应用。
Appl Environ Microbiol. 2001 Apr;67(4):1613-8. doi: 10.1128/AEM.67.4.1613-1618.2001.
5
Excision of micronuclear-specific DNA requires parental expression of pdd2p and occurs independently from DNA replication in Tetrahymena thermophila.微核特异性DNA的切除需要亲本表达pdd2p,并且在嗜热四膜虫中独立于DNA复制发生。
Genes Dev. 1999 Nov 1;13(21):2852-62. doi: 10.1101/gad.13.21.2852.