Suppr超能文献

欧洲大陆白栎的系统发育地理结构。

Phylogeographic structure of white oaks throughout the European continent.

作者信息

Dumolin-Lapègue S, Demesure B, Fineschi S, Le Corre V, Petit R J

机构信息

Institute National de la Recherche Agronomique, Laboratoire de Génétique et d'Amélioration des Arbres Forestiers, Gazinet, France.

出版信息

Genetics. 1997 Aug;146(4):1475-87. doi: 10.1093/genetics/146.4.1475.

Abstract

Patterns of chloroplast DNA (cpDNA) variation were studied in eight white oak species by sampling 345 populations throughout Europe. The detection of polymorphisms by restriction analysis of PCR-amplified cpDNA fragments allowed the identification of 23 haplotypes that were phylogenetically ordered. A systematic hybridization and introgression between the eight species studied is evident. The levels of subdivision for unordered (GST) and ordered (NST) alleles are very high and close (0.83 and 0.85). A new statistical approach to the quantitative study of phylogeography is presented, which relies on the coefficients of differentiation GST and NST and the Mantel's test. Based on pairwise comparisons between populations, the significance of the difference between both coefficients is evaluated at a global and a local scale. The mapped distribution of the haplotypes indicates the probable routes of postglacial recolonization followed by oak populations that had persisted in southern refugia, especially in the Iberian peninsula, Italy and the Balkans. Most cpDNA polymorphisms appear to be anterior to the beginning of the last recolonization. A subset of the preexisting haplotypes have merely expanded north, while others were left behind in the south.

摘要

通过对欧洲各地345个种群进行采样,研究了8种白栎叶绿体DNA(cpDNA)的变异模式。通过对PCR扩增的cpDNA片段进行限制性分析来检测多态性,从而鉴定出23种系统发育有序的单倍型。所研究的8个物种之间存在明显的系统杂交和基因渗入现象。无序等位基因(GST)和有序等位基因(NST)的细分水平非常高且相近(分别为0.83和0.85)。本文提出了一种用于系统地理学定量研究的新统计方法,该方法依赖于分化系数GST和NST以及Mantel检验。基于种群间的成对比较,在全球和局部尺度上评估了这两个系数之间差异的显著性。单倍型的分布图显示了在南部避难所(特别是伊比利亚半岛、意大利和巴尔干半岛)持续存在的栎树种群在冰期后重新定殖的可能路线。大多数cpDNA多态性似乎早于最后一次重新定殖开始之前就已存在。一部分先前存在的单倍型仅向北扩张,而其他单倍型则留在了南方。

相似文献

1
Phylogeographic structure of white oaks throughout the European continent.
Genetics. 1997 Aug;146(4):1475-87. doi: 10.1093/genetics/146.4.1475.
2
Unique postglacial evolution of the hornbeam (Carpinus betulus L.) in the Carpathians and the Balkan Peninsula revealed by chloroplast DNA.
Sci Total Environ. 2017 Dec 1;599-600:1493-1502. doi: 10.1016/j.scitotenv.2017.05.062. Epub 2017 May 17.
4
Chloroplast DNA phylogeography of the argan tree of Morocco.
Mol Ecol. 1996 Aug;5(4):547-55. doi: 10.1111/j.1365-294x.1996.tb00346.x.
5
Association between chloroplast and mitochondrial lineages in oaks.
Mol Biol Evol. 1998 Oct;15(10):1321-31. doi: 10.1093/oxfordjournals.molbev.a025860.
6
Chloroplast DNA diversity of the dioecious European tree Ilex aquifolium L. (English holly).
Mol Ecol. 2003 Oct;12(10):2681-8. doi: 10.1046/j.1365-294x.2003.01934.x.
7
Chloroplast DNA variation and postglacial recolonization of common ash (Fraxinus excelsior L.) in Europe.
Mol Ecol. 2004 Nov;13(11):3437-52. doi: 10.1111/j.1365-294X.2004.02333.x.
8
Contrasting patterns of historical colonization in white oaks (Quercus spp.) in California and Europe.
Mol Ecol. 2006 Nov;15(13):4085-93. doi: 10.1111/j.1365-294X.2006.03083.x.
10
Chloroplast DNA variation in a rainforest tree (Aucoumea klaineana, burseraceae) in Gabon.
Mol Ecol. 2000 Mar;9(3):359-63. doi: 10.1046/j.1365-294x.2000.00859.x.

引用本文的文献

1
Evolutionary Histories of and .
Ecol Evol. 2024 Dec 24;14(12):e70721. doi: 10.1002/ece3.70721. eCollection 2024 Dec.
7
Oaks: an evolutionary success story.
New Phytol. 2020 May;226(4):987-1011. doi: 10.1111/nph.16274. Epub 2019 Dec 2.
10
A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting.
Ecol Evol. 2018 May 8;8(11):5837-5851. doi: 10.1002/ece3.4122. eCollection 2018 Jun.

本文引用的文献

1
Interspecific gene flow in sympatric oaks.
Proc Natl Acad Sci U S A. 1991 Mar 15;88(6):2540-4. doi: 10.1073/pnas.88.6.2540.
2
An enlarged set of consensus primers for the study of organelle DNA in plants.
Mol Ecol. 1997 Apr;6(4):393-7. doi: 10.1046/j.1365-294x.1997.00193.x.
3
Measuring and testing genetic differentiation with ordered versus unordered alleles.
Genetics. 1996 Nov;144(3):1237-45. doi: 10.1093/genetics/144.3.1237.
4
Chloroplast DNA phylogeography of the argan tree of Morocco.
Mol Ecol. 1996 Aug;5(4):547-55. doi: 10.1111/j.1365-294x.1996.tb00346.x.
5
Using chloroplast DNA to trace postglacial migration routes of oaks into Britain.
Mol Ecol. 1995 Dec;4(6):731-8. doi: 10.1111/j.1365-294x.1995.tb00273.x.
6
Rates and patterns of chloroplast DNA evolution.
Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):6795-801. doi: 10.1073/pnas.91.15.6795.
7
Native oak chloroplasts reveal an ancient divide across Europe.
Mol Ecol. 1993 Dec;2(6):337-44. doi: 10.1111/j.1365-294x.1993.tb00026.x.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验