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通过光镊纳米技术测量单个驱动蛋白分子的力学特性。

Mechanics of single kinesin molecules measured by optical trapping nanometry.

作者信息

Kojima H, Muto E, Higuchi H, Yanagida T

机构信息

Yanagida Biomotron Project, ERATO, JST, Mino, Osaka, Japan.

出版信息

Biophys J. 1997 Oct;73(4):2012-22. doi: 10.1016/S0006-3495(97)78231-6.

DOI:10.1016/S0006-3495(97)78231-6
PMID:9336196
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1181101/
Abstract

We have analyzed the mechanics of individual kinesin molecules by optical trapping nanometry. A kinesin molecule was adsorbed onto a latex bead, which was captured by an optical trap and brought into contact with an axoneme that was bound to a glass surface. The displacement of kinesin during force generation was determined by measuring the position of the beads with nanometer accuracy. As the displacement of kinesin was attenuated because of the compliance of the kinesin-to-bead and kinesin-to-microtubule linkages, the compliance was monitored during force generation and was used to correct the displacement of kinesin. Thus the velocity and the unitary steps could be obtained accurately over a wide force range. The force-velocity curves were linear from 0 to a maximum force at 10 microM and 1 mM ATP, and the maximum force was approximately 7 pN, which is larger by approximately 30% than values previously reported. Kinesin exhibited forward and occasionally backward stepwise displacements with a size of approximately 8 nm. The histograms of step dwell time show a monotonic decrease with time. Model calculations indicate that each kinesin head steps by 16-nm, whereas kinesin molecule steps by 8-nm.

摘要

我们通过光镊纳米技术分析了单个驱动蛋白分子的力学特性。将一个驱动蛋白分子吸附到一个乳胶珠上,该乳胶珠被光镊捕获并与结合在玻璃表面的轴丝接触。在产生力的过程中,驱动蛋白的位移通过以纳米精度测量珠子的位置来确定。由于驱动蛋白与珠子以及驱动蛋白与微管连接的柔韧性,驱动蛋白的位移会衰减,因此在产生力的过程中监测柔韧性,并用于校正驱动蛋白的位移。这样就能在很宽的力范围内准确获得速度和单位步长。在10 microM和1 mM ATP条件下,力-速度曲线在从0到最大力的范围内呈线性,最大力约为7 pN,比之前报道的值大约大30%。驱动蛋白表现出向前以及偶尔向后的约8 nm大小的逐步位移。步长停留时间的直方图显示随时间单调递减。模型计算表明,每个驱动蛋白头部移动16 nm,而驱动蛋白分子移动8 nm。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c25d/1181101/0cf7f9d3f441/biophysj00031-0327-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c25d/1181101/787579df87a0/biophysj00031-0324-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c25d/1181101/0cf7f9d3f441/biophysj00031-0327-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c25d/1181101/787579df87a0/biophysj00031-0324-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c25d/1181101/0cf7f9d3f441/biophysj00031-0327-a.jpg

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DNA tensiometer reveals catch-bond detachment kinetics of kinesin-1, -2 and -3.DNA张力计揭示驱动蛋白-1、-2和-3的捕获键解离动力学。
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本文引用的文献

1
Movements of truncated kinesin fragments with a short or an artificial flexible neck.具有短的或人工柔性颈部的截短驱动蛋白片段的运动
Proc Natl Acad Sci U S A. 1997 Jul 8;94(14):7275-80. doi: 10.1073/pnas.94.14.7275.
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Actin filament mechanics in the laser trap.激光阱中的肌动蛋白丝力学
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Kinetics of force generation by single kinesin molecules activated by laser photolysis of caged ATP.通过笼形ATP的激光光解激活的单个驱动蛋白分子产生力的动力学。
非热涨落加速生物分子马达。
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Competition between physical search and a weak-to-strong transition rate-limits kinesin binding times.物理搜索与弱至强转变速率限制的肌球蛋白结合时间之间的竞争。
PLoS Comput Biol. 2024 May 20;20(5):e1012158. doi: 10.1371/journal.pcbi.1012158. eCollection 2024 May.
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ADP release can explain spatially-dependent kinesin binding times.二磷酸腺苷(ADP)的释放可以解释驱动蛋白结合时间的空间依赖性。
bioRxiv. 2023 Nov 10:2023.11.08.563482. doi: 10.1101/2023.11.08.563482.
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Axonal transport during injury on a theoretical axon.理论轴突损伤时的轴突运输
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Versatile properties of dynein molecules underlying regulation in flagellar oscillation.驱动蛋白分子的多功能性基础在于其对鞭毛摆动的调节作用。
Sci Rep. 2023 Jun 29;13(1):10514. doi: 10.1038/s41598-023-37242-6.
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Direct Measurement of Kinetic Force Generated by Mycoplasma.直接测量支原体产生的动力。
Methods Mol Biol. 2023;2646:337-346. doi: 10.1007/978-1-0716-3060-0_28.
9
Microtubule Dumbbells to Assess the Effect of Force Geometry on Single Kinesin Motors.微管哑铃评估力几何形状对单个驱动蛋白马达的影响。
Methods Mol Biol. 2022;2478:559-583. doi: 10.1007/978-1-0716-2229-2_20.
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Force generation of KIF1C is impaired by pathogenic mutations.致病突变会损害 KIF1C 的产生力。
Curr Biol. 2022 Sep 12;32(17):3862-3870.e6. doi: 10.1016/j.cub.2022.07.029. Epub 2022 Aug 11.
Proc Natl Acad Sci U S A. 1997 Apr 29;94(9):4395-400. doi: 10.1073/pnas.94.9.4395.
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Three-dimensional cryoelectron microscopy of dimeric kinesin and ncd motor domains on microtubules.微管上二聚体驱动蛋白和ncd运动结构域的三维冷冻电子显微镜观察。
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Multiple- and single-molecule analysis of the actomyosin motor by nanometer-piconewton manipulation with a microneedle: unitary steps and forces.通过微针进行纳米皮牛顿操作对肌动球蛋白马达进行多分子和单分子分析:单位步长和力。
Biophys J. 1996 Jan;70(1):383-400. doi: 10.1016/S0006-3495(96)79582-6.
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Detection of sub-8-nm movements of kinesin by high-resolution optical-trap microscopy.利用高分辨率光镊显微镜检测驱动蛋白小于8纳米的运动。
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Crystal structure of the kinesin motor domain reveals a structural similarity to myosin.驱动蛋白运动结构域的晶体结构揭示了其与肌球蛋白的结构相似性。
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Direct observation of single kinesin molecules moving along microtubules.直接观察单个驱动蛋白分子沿微管移动。
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Recombinant kinesin motor domain binds to beta-tubulin and decorates microtubules with a B surface lattice.重组驱动蛋白运动结构域与β-微管蛋白结合,并以B表面晶格装饰微管。
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Direct observation of kinesin stepping by optical trapping interferometry.通过光镊干涉测量法直接观察驱动蛋白的步移。
Nature. 1993 Oct 21;365(6448):721-7. doi: 10.1038/365721a0.