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球囊霉门真菌DNA的碱基组成:大量甲基化胞嘧啶

Base composition of DNA from glomalean fungi: high amounts of methylated cytosine.

作者信息

Hosny M, Païs de Barros J P, Gianinazzi-Pearson V, Dulieu H

机构信息

Laboratoire de Phytoparasitologie, INRA/CNRS, CMSE-INRA, Dijon Cédex, 21034, France.

出版信息

Fungal Genet Biol. 1997 Oct;22(2):103-11. doi: 10.1006/fgbi.1997.1008.

Abstract

Glomales (Zygomycetes) are obligate fungal symbionts of roots of land plants and form arbuscular mycorrhiza. Sporal DNA of 10 isolates belonging to nine species was purified and the base composition was determined by RP-HPLC. Base composition fell in a narrow range between 30 and 35% G + C. A high amount of methylated cytosine (mC) accounting for 2-4% of the total nucleotides was found in all taxa. The DNA melting profile was defined for Scutellospora castanea. It corresponded to 32% G + C, and the shape of the denaturation curve suggested a heterogeneity in the GC content within the fungal genome. Knowledge of GC contents and variations between taxa are essential for evaluating nuclear DNA content using fluorimetric methods, and high proportions of mC/C + mC in the genomes of glomalean fungi could reflect the existence of repeated DNA families. Results are discussed in relation to data for other fungi and eukaryotes.

摘要

球囊霉目(接合菌纲)是陆地植物根系的专性真菌共生体,可形成丛枝菌根。纯化了属于9个物种的10个分离株的孢子DNA,并通过反相高效液相色谱法测定碱基组成。碱基组成落在30%至35%的G + C的狭窄范围内。在所有分类群中均发现了占总核苷酸2%至4%的大量甲基化胞嘧啶(mC)。确定了栗色盾巨孢囊霉的DNA解链图谱。其对应于32%的G + C,变性曲线的形状表明真菌基因组内GC含量存在异质性。了解GC含量和分类群之间的差异对于使用荧光法评估核DNA含量至关重要,而球囊霉目真菌基因组中高比例的mC/C + mC可能反映了重复DNA家族的存在。结合其他真菌和真核生物的数据对结果进行了讨论。

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