转录调控数据库：TRANSFAC、TRRD和COMPEL。
Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL.
作者信息
Heinemeyer T, Wingender E, Reuter I, Hermjakob H, Kel A E, Kel O V, Ignatieva E V, Ananko E A, Podkolodnaya O A, Kolpakov F A, Podkolodny N L, Kolchanov N A
机构信息
Gesellschaft für Biotechnologische Forschung mbH, Mascheroder Weg 1, D-38124 Braunschweig, Germany.
出版信息
Nucleic Acids Res. 1998 Jan 1;26(1):362-7. doi: 10.1093/nar/26.1.362.
Abstract
TRANSFAC, TRRD (Transcription Regulatory Region Database) and COMPEL are databases which store information about transcriptional regulation in eukaryotic cells. The three databases provide distinct views on the components involved in transcription: transcription factors and their binding sites and binding profiles (TRANSFAC), the regulatory hierarchy of whole genes (TRRD), and the structural and functional properties of composite elements (COMPEL). The quantitative and qualitative changes of all three databases and connected programs are described. The databases are accessible via WWW:http://transfac.gbf.de/TRANSFAC orhttp://www.bionet.nsc.ru/TRRD
摘要
TRANSFAC、TRRD（转录调控区域数据库）和COMPEL是存储真核细胞转录调控信息的数据库。这三个数据库对转录相关组件提供了不同的视图：转录因子及其结合位点和结合图谱（TRANSFAC）、全基因的调控层次结构（TRRD）以及复合元件的结构和功能特性（COMPEL）。描述了所有三个数据库及相关程序的定量和定性变化。可通过万维网访问这些数据库：http://transfac.gbf.de/TRANSFAC 或 http://www.bionet.nsc.ru/TRRD
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