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恶臭假单胞菌生物型B中酮甾体异构酶的三个半胱氨酸和活性位点天冬氨酸103的突变分析

Mutational analysis of the three cysteines and active-site aspartic acid 103 of ketosteroid isomerase from Pseudomonas putida biotype B.

作者信息

Kim S W, Joo S, Choi G, Cho H S, Oh B H, Choi K Y

机构信息

Department of Life Sciences and Center for Biofunctional Molecules, Pohang University of Science and Technology, Kyungbuk, Korea.

出版信息

J Bacteriol. 1997 Dec;179(24):7742-7. doi: 10.1128/jb.179.24.7742-7747.1997.

Abstract

In order to clarify the roles of three cysteines in ketosteroid isomerase (KSI) from Pseudomonas putida biotype B, each of the cysteine residues has been changed to a serine residue (C69S, C81S, and C97S) by site-directed mutagenesis. All cysteine mutations caused only a slight decrease in the k(cat) value, with no significant change of Km for the substrate. Even modification of the sulfhydryl group with 5,5'-dithiobis(2-nitrobenzoic acid) has almost no effect on enzyme activity. These results demonstrate that none of the cysteines in the KSI from P. putida is critical for catalytic activity, contrary to the previous identification of a cysteine in an active-site-directed photoinactivation study of KSI. Based on the three-dimensional structures of KSIs with and without dienolate intermediate analog equilenin, as determined by X-ray crystallography at high resolution, Asp-103 was found to be located within the range of the hydrogen bond to the equilenin. To assess the role of Asp-103 in catalysis, Asp-103 has been replaced with either asparagine (D103N) or alanine (D103A) by site-directed mutagenesis. For D103A mutant KSI there was a significant decrease in the k(cat) value: the k(cat) of the mutant was 85-fold lower than that of the wild-type enzyme; however, for the D103N mutant, which retained some hydrogen bonding capability, there was a minor decrease in the k(cat) value. These findings support the idea that aspartic acid 103 in the active site is an essential catalytic residue involved in catalysis by hydrogen bonding to the dienolate intermediate.

摘要

为了阐明恶臭假单胞菌生物型B的酮甾体异构酶(KSI)中三个半胱氨酸的作用,通过定点诱变将每个半胱氨酸残基都替换为丝氨酸残基(C69S、C81S和C97S)。所有半胱氨酸突变仅使k(cat)值略有下降,底物的Km值无显著变化。即使使用5,5'-二硫代双(2-硝基苯甲酸)修饰巯基,对酶活性也几乎没有影响。这些结果表明,恶臭假单胞菌KSI中的半胱氨酸对催化活性均无关键作用,这与之前在KSI的活性位点定向光灭活研究中鉴定出的一个半胱氨酸情况相反。基于通过高分辨率X射线晶体学测定的有和没有烯醇中间体类似物马萘雌酮的KSI三维结构,发现Asp-103位于与马萘雌酮形成氢键的范围内。为了评估Asp-103在催化中的作用,通过定点诱变将Asp-103替换为天冬酰胺(D103N)或丙氨酸(D103A)。对于D103A突变体KSI,k(cat)值显著下降:突变体的k(cat)比野生型酶低85倍;然而,对于保留了一些氢键能力的D103N突变体,k(cat)值略有下降。这些发现支持了活性位点中的天冬氨酸103是通过与烯醇中间体形成氢键参与催化的必需催化残基这一观点。

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