Kaymer M, Debes A, Kress H, Kurzik-Dumke U
Institut für Genetik, Johannes Gutenberg-Universität, Mainz, Germany.
Gene. 1997 Dec 19;204(1-2):91-103. doi: 10.1016/s0378-1119(97)00528-3.
In this study, we describe the isolation of the Drosophila virilis (Dvir) 6201-bp genomic fragment homologous to a 7047-bp genomic region of D. melanogaster (Dmel) that harbors the nested genes lethal(2) tumorous imaginal discs (l(2)tid), lethal(2) neighbour of tid (l(2)not) and lethal(2) relative of tid (l(2)rot). The isolated fragment, which maps at the cytogenetic position 50A5 on chromosome 5, carries the Dvir homologs of the Dmel genes l(2)tid and l(2)not. In both cases, the interspecific comparison of the determined sequences reveals a high homology regarding the protein coding regions and a high degree of evolutionary divergence concerning the intronic parts of the genes. In the two distantly related species, the particular gene within gene arrangement of the two genes is conserved, namely, Dvir tid is located in the intron of Dvir not, on the non-coding DNA strand. Interestingly, the Dvir homolog of the Dmel l(2)rot gene residing in the l(2)not intron on its coding strand, opposite l(2)tid, is not present in the 6201-bp genomic fragment. The protein predicted from the Dvir tid sequence, Dvir Tid58, exhibits 76.5% identity with the putative Tid56 protein of Dmel. The putative Dvir Not58 protein shows 71% identity with its Dmel homolog Not56. The developmental transcript and protein patterns, as well as the characteristics of the protein products encoded by the genes Dvir tid and Dvir not are similar to those identified for their Dmel homologs.
在本研究中,我们描述了果蝇(Drosophila virilis,Dvir)中一个6201 bp基因组片段的分离,该片段与黑腹果蝇(D. melanogaster,Dmel)的一个7047 bp基因组区域同源,该区域包含嵌套基因致死(2)肿瘤性成虫盘(lethal(2) tumorous imaginal discs,l(2)tid)、致死(2)tid的邻居(lethal(2) neighbour of tid,l(2)not)和致死(2)tid的亲属(lethal(2) relative of tid,l(2)rot)。分离出的片段定位于第5号染色体的细胞遗传学位置50A5,携带Dmel基因l(2)tid和l(2)not的Dvir同源物。在这两种情况下,对所确定序列的种间比较显示,蛋白质编码区域具有高度同源性,而基因的内含子部分则具有高度的进化分歧。在这两个远缘物种中,这两个基因的基因内特定基因排列是保守的,即Dvir tid位于Dvir not的内含子中,在非编码DNA链上。有趣的是,位于l(2)not内含子编码链上、与l(2)tid相对的Dmel l(2)rot基因的Dvir同源物在6201 bp基因组片段中不存在。从Dvir tid序列预测的蛋白质Dvir Tid58与Dmel的假定Tid56蛋白质具有76.5%的同一性。假定的Dvir Not58蛋白质与其Dmel同源物Not56具有71%的同一性。Dvir tid和Dvir not基因的发育转录本和蛋白质模式以及所编码蛋白质产物的特征与它们的Dmel同源物所鉴定的相似。