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未鉴定的人类基因编码序列的预测。VIII. 来自大脑的78个新的cDNA克隆,其在体外编码大蛋白。

Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro.

作者信息

Ishikawa K, Nagase T, Nakajima D, Seki N, Ohira M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O

机构信息

Kazusa DNA Research Institute, Chiba, Japan.

出版信息

DNA Res. 1997 Oct 31;4(5):307-13. doi: 10.1093/dnares/4.5.307.

Abstract

As a part of our project for accumulating sequence information of the coding regions of unidentified human genes, we herein report the sequence features of 78 new cDNA clones isolated from human brain cDNA libraries as those which may code for large proteins. The sequence data showed that the average size of the cDNA inserts and their open reading frames was 6.0 kb and 2.8 kb (925 amino acid residues), respectively, and these clones produced the corresponding sizes of protein products in an in vitro transcription/translation system. Homology search against the public databases indicated that the predicted coding sequences of 68 genes contained sequences similar to known genes, 69% of which (47 genes) were related to cell signaling/communication, nucleic acid management, and cell structure/motility. The expression profiles of these genes in 14 different tissues have been analyzed by the reverse transcription-coupled polymerase chain reaction method, and 8 genes were found to be predominantly expressed in the brain.

摘要

作为我们积累未鉴定人类基因编码区序列信息项目的一部分,我们在此报告从人脑cDNA文库中分离出的78个新cDNA克隆的序列特征,这些克隆可能编码大蛋白。序列数据显示,cDNA插入片段及其开放阅读框的平均大小分别为6.0 kb和2.8 kb(925个氨基酸残基),并且这些克隆在体外转录/翻译系统中产生了相应大小的蛋白质产物。对公共数据库的同源性搜索表明,68个基因的预测编码序列包含与已知基因相似的序列,其中69%(47个基因)与细胞信号传导/通讯、核酸管理以及细胞结构/运动相关。通过逆转录偶联聚合酶链反应方法分析了这些基因在14种不同组织中的表达谱,发现8个基因在脑中主要表达。

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