Li H, Yamada H, Akasaka K
Division of Molecular Science, Graduate School of Science and Technology, Kobe University, Japan.
Biochemistry. 1998 Feb 3;37(5):1167-73. doi: 10.1021/bi972288j.
By performing two-dimensional 1H NMR measurements at 750 MHz at varying hydrostatic pressure (1-2000 bar) in an aqueous environment (90% 1H2O/10% 2H2O), we found that the signals of the peptide NH protons of basic pancreatic trypsin inhibitor (BPTI) in the folded state shift their positions linearly and reversibly with pressure. The strong tendency for low-field shifts of these protons indicates that most of the amide groups form hydrogen bonds either with carbonyls or with water and that these hydrogen bonds are shortened by pressure. The NH protons interacting favorably with solvent water tend to exhibit larger pressure-induced shifts than others, showing that the shift can be used as a diagnostic probe for the hydrogen bonding state of an NH group with water. Furthermore, we estimated shortening of individual H...O distances of the NH...O=C hydrogen bonds at 2000 bar on the basis of the empirical shift-distance correlation for BPTI. The estimated shortened distances varied considerably from site to site in the range of 0-0.11 A, larger in the turn but smaller in the interiors of secondary structures. These variations suggest that the volume fluctuation is heterogeneous within BPTI and that high-pressure NMR at high field can offer a unique opportunity for detecting microscopic structural fluctuation in proteins.
通过在750兆赫下于水环境(90% 1H2O/10% 2H2O)中,在变化的静水压力(1 - 2000巴)下进行二维1H NMR测量,我们发现折叠状态下碱性胰蛋白酶抑制剂(BPTI)的肽NH质子信号随压力线性且可逆地移动其位置。这些质子向低场移动的强烈趋势表明,大多数酰胺基团与羰基或水形成氢键,并且这些氢键会因压力而缩短。与溶剂水相互作用良好的NH质子往往比其他质子表现出更大的压力诱导位移,这表明该位移可作为NH基团与水的氢键状态的诊断探针。此外,我们基于BPTI的经验位移 - 距离相关性,估计了在2000巴时NH...O = C氢键中各个H...O距离的缩短情况。估计的缩短距离在不同位点之间变化很大,范围为0 - 0.11埃,在转角处较大而在二级结构内部较小。这些变化表明BPTI内部的体积波动是不均匀的,并且高场高压NMR可以为检测蛋白质中的微观结构波动提供独特的机会。