Suppr超能文献

RNA聚合酶中的力产生

Force generation in RNA polymerase.

作者信息

Wang H Y, Elston T, Mogilner A, Oster G

机构信息

Department of Molecular and Cellular Biology, University of California, Berkeley 94720-3112, USA.

出版信息

Biophys J. 1998 Mar;74(3):1186-202. doi: 10.1016/S0006-3495(98)77834-8.

Abstract

RNA polymerase (RNAP) is a processive molecular motor capable of generating forces of 25-30 pN, far in excess of any other known ATPase. This force derives from the hydrolysis free energy of nucleotides as they are incorporated into the growing RNA chain. The velocity of procession is limited by the rate of pyrophosphate release. Here we demonstrate how nucleotide triphosphate binding free energy can rectify the diffusion of RNAP, and show that this is sufficient to account for the quantitative features of the measured load-velocity curve. Predictions are made for the effect of changing pyrophosphate and nucleotide concentrations and for the statistical behavior of the system.

摘要

RNA聚合酶(RNAP)是一种持续性分子马达,能够产生25-30皮牛的力,远远超过任何其他已知的ATP酶。这种力源于核苷酸水解自由能,当它们被掺入不断增长的RNA链中时。行进速度受焦磷酸释放速率的限制。在这里,我们展示了三磷酸核苷酸结合自由能如何纠正RNAP的扩散,并表明这足以解释测量的负载-速度曲线的定量特征。对改变焦磷酸和核苷酸浓度的影响以及系统的统计行为进行了预测。

相似文献

1
Force generation in RNA polymerase.RNA聚合酶中的力产生
Biophys J. 1998 Mar;74(3):1186-202. doi: 10.1016/S0006-3495(98)77834-8.
2
Unraveling the mysteries of transcription.揭开转录的奥秘。
Nat Struct Biol. 1999 Jun;6(6):497-9. doi: 10.1038/9260.
3
Transcription rate of RNA polymerase under rotary torque.旋转扭矩下RNA聚合酶的转录速率
Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Apr;69(4 Pt 1):041902. doi: 10.1103/PhysRevE.69.041902. Epub 2004 Apr 16.
7
8
9
Single-molecule analysis of RNA polymerase transcription.RNA聚合酶转录的单分子分析
Annu Rev Biophys Biomol Struct. 2006;35:343-60. doi: 10.1146/annurev.biophys.35.010406.150153.
10
Direct observation of base-pair stepping by RNA polymerase.RNA聚合酶碱基对步移的直接观察。
Nature. 2005 Nov 24;438(7067):460-5. doi: 10.1038/nature04268. Epub 2005 Nov 13.

引用本文的文献

5
Optical tweezers in single-molecule biophysics.单分子生物物理学中的光镊
Nat Rev Methods Primers. 2021;1. doi: 10.1038/s43586-021-00021-6. Epub 2021 Mar 25.
9
Mechanisms for achieving high speed and efficiency in biomolecular machines.生物分子机器实现高速和高效的机制。
Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):5902-5907. doi: 10.1073/pnas.1812149116. Epub 2019 Mar 8.

本文引用的文献

3
Catalytic mechanism of F1-ATPase.F1-ATP酶的催化机制。
Biochim Biophys Acta. 1997 Mar 28;1319(1):19-58. doi: 10.1016/s0005-2728(96)00121-1.
5
Cell motility driven by actin polymerization.由肌动蛋白聚合驱动的细胞运动。
Biophys J. 1996 Dec;71(6):3030-45. doi: 10.1016/S0006-3495(96)79496-1.
6
Statistical kinetics of processive enzymes.
Cold Spring Harb Symp Quant Biol. 1995;60:793-802. doi: 10.1101/sqb.1995.060.01.085.
8
9
Torque generated by the flagellar motor of Escherichia coli.大肠杆菌鞭毛马达产生的扭矩。
Biophys J. 1993 Nov;65(5):2201-16. doi: 10.1016/S0006-3495(93)81278-5.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验