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1
High-resolution structures of single-metal-substituted concanavalin A: the Co,Ca-protein at 1.6 A and the Ni,Ca-protein at 2.0 A.单金属取代伴刀豆球蛋白A的高分辨率结构:钴、钙蛋白分辨率为1.6埃,镍、钙蛋白分辨率为2.0埃。
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):749-56. doi: 10.1107/S0907444994002143.
2
Redefinition of the carbohydrate specificity of Erythrina corallodendron lectin based on solid-phase binding assays and molecular modeling of native and recombinant forms obtained by site-directed mutagenesis.基于固相结合分析以及通过定点诱变获得的天然和重组形式的分子模型,对刺桐凝集素的碳水化合物特异性进行重新定义。
Biochemistry. 1997 Apr 15;36(15):4429-37. doi: 10.1021/bi962231h.
3
Structural basis of lectin-carbohydrate recognition.凝集素-碳水化合物识别的结构基础。
Annu Rev Biochem. 1996;65:441-73. doi: 10.1146/annurev.bi.65.070196.002301.
4
Mutational studies of the amino acid residues in the combining site of Erythrina corallodendron lectin.刺桐凝集素结合位点氨基酸残基的突变研究。
Eur J Biochem. 1996 Aug 1;239(3):668-74. doi: 10.1111/j.1432-1033.1996.0668u.x.
5
Crystallographic structure of metal-free concanavalin A at 2.5 A resolution.分辨率为2.5埃的无金属伴刀豆球蛋白A的晶体结构。
Proteins. 1995 Dec;23(4):510-24. doi: 10.1002/prot.340230406.
6
The crystallographic structure of phytohemagglutinin-L.植物血凝素-L的晶体结构。
J Biol Chem. 1996 Aug 23;271(34):20479-85. doi: 10.1074/jbc.271.34.20479.
7
Thermodynamics of monosaccharide and disaccharide binding to Erythrina corallodendron lectin.单糖和二糖与刺桐凝集素结合的热力学
J Biol Chem. 1996 Jul 26;271(30):17697-703. doi: 10.1074/jbc.271.30.17697.
8
Modification by site-directed mutagenesis of the specificity of Erythrina corallodendron lectin for galactose derivatives with bulky substituents at C-2.通过定点诱变修饰刺桐凝集素对C-2位带有庞大取代基的半乳糖衍生物的特异性。
FEBS Lett. 1993 Sep 13;330(2):133-6. doi: 10.1016/0014-5793(93)80258-v.
9
Characterization of binding of Gal beta 4GlcNAc-specific lectins from Erythrina cristagalli and Erythrina corallodendron to glycosphinogolipids. Detection, isolation, and characterization of a novel glycosphinglipid of bovine buttermilk.刺桐和珊瑚刺桐中Galβ4GlcNAc特异性凝集素与糖鞘脂结合的特性。牛乳中一种新型糖鞘脂的检测、分离与特性分析。
J Biol Chem. 1994 Mar 18;269(11):8554-63.
10
The sequence of a second member of the lima bean lectin gene family and the expression and characterization of recombinant lectin in Escherichia coli.利马豆凝集素基因家族第二个成员的序列以及重组凝集素在大肠杆菌中的表达与特性分析
J Biol Chem. 1994 Mar 11;269(10):7674-81.

刺桐凝集素结合位点区域的结构特征:色氨酸135的作用

Structural features of the combining site region of Erythrina corallodendron lectin: role of tryptophan 135.

作者信息

Adar R, Moreno E, Streicher H, Karlsson K A, Angström J, Sharon N

机构信息

Department of Membrane Research and Biophysics, The Weizmann Institute of Science, Rehovot, Israel.

出版信息

Protein Sci. 1998 Jan;7(1):52-63. doi: 10.1002/pro.5560070105.

DOI:10.1002/pro.5560070105
PMID:9514259
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2143815/
Abstract

The role of Trp 135 and Tyr 108 in the combining site of Erythrina corallodendron lectin (ECorL) was investigated by physicochemical characterization of mutants obtained by site-directed mutagenesis, hemagglutination-inhibition studies, and molecular modeling, including dynamics simulations. The findings demonstrate that Trp 135 in ECorL: (1) is required for the tight binding of Ca2+ and Mn2+ to the lectin because mutation of this residue into alanine results in loss of these ions upon dialysis and concomitant reversible inactivation of the mutant; (2) contributes to the high affinity of methyl alpha-N-dansylgalactosaminide (MealphaGalNDns) to the lectin; and (3) is solely responsible for the fluorescence energy transfer between the aromatic residues of the lectin and the dansyl group in the ECorL-MealphaGalNDns complex. Docking of MealphaGalNDns into the combining site of the lectin reveals that the dansyl moiety is parallel with the indole of Trp 135, as required for efficient fluorescence energy transfer, in one of the two possible conformations that this ligand assumes in the bound state. In the W135A mutant, which still binds MealphaGalNDns strongly, the dansyl group may partially insert itself into the place formerly occupied by Trp 135, a process that from dynamics simulations does not appear to be energetically favored unless the loop containing this residue assumes an open conformation. However, a small fraction of the W135A molecules must be able to bind MealphaGalNDns in order to explain the relatively high affinity, as compared to galactose, still remaining for this ligand. A model for the molecular events leading to inactivation of the W135A mutant upon demetallization is also presented in which the cis-trans isomerization of the Ala 88-Asp 89 peptide bond, observed in high-temperature dynamics simulations, appears not to be a required step.

摘要

通过对定点诱变获得的突变体进行物理化学表征、血凝抑制研究和分子建模(包括动力学模拟),研究了刺桐凝集素(ECorL)结合位点中色氨酸135(Trp 135)和酪氨酸108(Tyr 108)的作用。研究结果表明,ECorL中的Trp 135:(1)是Ca2+和Mn2+与凝集素紧密结合所必需的,因为将该残基突变为丙氨酸会导致透析后这些离子的丢失以及突变体的可逆失活;(2)有助于甲基α-N-丹磺酰半乳糖胺(MeαGalNDns)与凝集素的高亲和力;(3)是ECorL-MeαGalNDns复合物中凝集素芳香族残基与丹磺酰基团之间荧光能量转移的唯一原因。将MeαGalNDns对接至凝集素的结合位点表明,在该配体在结合状态下假定的两种可能构象之一中,丹磺酰部分与Trp 135的吲哚平行,这是有效荧光能量转移所必需的。在仍能强烈结合MeαGalNDns的W135A突变体中,丹磺酰基团可能会部分插入以前由Trp 135占据的位置,除非包含该残基的环呈开放构象,否则从动力学模拟来看,这一过程在能量上似乎并不有利。然而,一小部分W135A分子必须能够结合MeαGalNDns,以便解释与半乳糖相比,该配体仍具有相对较高的亲和力。还提出了一个导致脱金属后W135A突变体失活的分子事件模型,其中在高温动力学模拟中观察到的Ala 88-Asp 89肽键的顺反异构化似乎不是必需步骤。