Adar R, Moreno E, Streicher H, Karlsson K A, Angström J, Sharon N
Department of Membrane Research and Biophysics, The Weizmann Institute of Science, Rehovot, Israel.
Protein Sci. 1998 Jan;7(1):52-63. doi: 10.1002/pro.5560070105.
The role of Trp 135 and Tyr 108 in the combining site of Erythrina corallodendron lectin (ECorL) was investigated by physicochemical characterization of mutants obtained by site-directed mutagenesis, hemagglutination-inhibition studies, and molecular modeling, including dynamics simulations. The findings demonstrate that Trp 135 in ECorL: (1) is required for the tight binding of Ca2+ and Mn2+ to the lectin because mutation of this residue into alanine results in loss of these ions upon dialysis and concomitant reversible inactivation of the mutant; (2) contributes to the high affinity of methyl alpha-N-dansylgalactosaminide (MealphaGalNDns) to the lectin; and (3) is solely responsible for the fluorescence energy transfer between the aromatic residues of the lectin and the dansyl group in the ECorL-MealphaGalNDns complex. Docking of MealphaGalNDns into the combining site of the lectin reveals that the dansyl moiety is parallel with the indole of Trp 135, as required for efficient fluorescence energy transfer, in one of the two possible conformations that this ligand assumes in the bound state. In the W135A mutant, which still binds MealphaGalNDns strongly, the dansyl group may partially insert itself into the place formerly occupied by Trp 135, a process that from dynamics simulations does not appear to be energetically favored unless the loop containing this residue assumes an open conformation. However, a small fraction of the W135A molecules must be able to bind MealphaGalNDns in order to explain the relatively high affinity, as compared to galactose, still remaining for this ligand. A model for the molecular events leading to inactivation of the W135A mutant upon demetallization is also presented in which the cis-trans isomerization of the Ala 88-Asp 89 peptide bond, observed in high-temperature dynamics simulations, appears not to be a required step.
通过对定点诱变获得的突变体进行物理化学表征、血凝抑制研究和分子建模(包括动力学模拟),研究了刺桐凝集素(ECorL)结合位点中色氨酸135(Trp 135)和酪氨酸108(Tyr 108)的作用。研究结果表明,ECorL中的Trp 135:(1)是Ca2+和Mn2+与凝集素紧密结合所必需的,因为将该残基突变为丙氨酸会导致透析后这些离子的丢失以及突变体的可逆失活;(2)有助于甲基α-N-丹磺酰半乳糖胺(MeαGalNDns)与凝集素的高亲和力;(3)是ECorL-MeαGalNDns复合物中凝集素芳香族残基与丹磺酰基团之间荧光能量转移的唯一原因。将MeαGalNDns对接至凝集素的结合位点表明,在该配体在结合状态下假定的两种可能构象之一中,丹磺酰部分与Trp 135的吲哚平行,这是有效荧光能量转移所必需的。在仍能强烈结合MeαGalNDns的W135A突变体中,丹磺酰基团可能会部分插入以前由Trp 135占据的位置,除非包含该残基的环呈开放构象,否则从动力学模拟来看,这一过程在能量上似乎并不有利。然而,一小部分W135A分子必须能够结合MeαGalNDns,以便解释与半乳糖相比,该配体仍具有相对较高的亲和力。还提出了一个导致脱金属后W135A突变体失活的分子事件模型,其中在高温动力学模拟中观察到的Ala 88-Asp 89肽键的顺反异构化似乎不是必需步骤。