Kavanaugh J S, Weydert J A, Rogers P H, Arnone A
Department of Biochemistry, College of Medicine, The University of Iowa, Iowa City, Iowa 52242, USA.
Biochemistry. 1998 Mar 31;37(13):4358-73. doi: 10.1021/bi9708702.
The high-resolution X-ray structures of the deoxy forms of four recombinant hemoglobins in which Trp37(C3)beta is replaced with Tyr (betaW37Y), Ala (betaW37A), Glu (betaW37E), or Gly (betaW37G) have been refined and analyzed with superposition methods that partition mutation-induced perturbations into quaternary structure changes and tertiary structure changes. In addition, a new cross-validation statistic that is sensitive to local changes in structure (a "local Rfree" parameter) was used as an objective measure of the significance of the tertiary structure changes. No significant mutation-induced changes in tertiary structure are detected at the mutation site itself for any of the four mutants studied. Instead, disruption of the intersubunit contacts associated with Trp37(C3)beta results in (1) a change in quaternary structure at the alpha1beta2 interface, (2) alpha subunit tertiary structure changes that are centered at Asp94(G1)alpha-Pro95(G2)alpha, (3) beta subunit tertiary structure changes that are located between residues Asp99(G1)beta and Asn102(G4)beta, (4) increased mobility of the alpha subunit COOH-terminal dipeptide, and (5) shortening of the Fe-Nepsilon2His(F8) bond in the alpha and beta subunits of the betaW37G and betaW37E mutants. In each case, the magnitude of the change in a particular structural parameter increases in the order betaW37Y < betaW37A < betaW37E approximately betaW37G, which corresponds closely to the degree of functional disruption documented in the preceding papers.
四种重组血红蛋白的脱氧形式的高分辨率X射线结构已得到优化和分析,其中Trp37(C3)β被Tyr(βW37Y)、Ala(βW37A)、Glu(βW37E)或Gly(βW37G)取代,采用叠加方法将突变引起的扰动分为四级结构变化和三级结构变化。此外,一种对结构局部变化敏感的新交叉验证统计量(“局部Rfree”参数)被用作衡量三级结构变化显著性的客观指标。在所研究的四个突变体中,在突变位点本身均未检测到显著的突变诱导三级结构变化。相反,与Trp37(C3)β相关的亚基间接触的破坏导致:(1)α1β2界面处的四级结构变化;(2)以Asp94(G1)α-Pro95(G2)α为中心的α亚基三级结构变化;(3)位于Asp99(G1)β和Asn102(G4)β残基之间的β亚基三级结构变化;(4)α亚基COOH末端二肽的流动性增加;(5)βW37G和βW37E突变体的α和β亚基中Fe-Nε2His(F8)键缩短。在每种情况下,特定结构参数的变化幅度按βW37Y < βW37A < βW37E≈βW37G的顺序增加,这与前文记录的功能破坏程度密切对应。