Gutheil W G
Department of Biochemistry, Meharry Medical College, Nashville, TN 37208, USA.
Biophys Chem. 1998 Mar 9;70(3):185-202. doi: 10.1016/s0301-4622(97)00120-8.
A method is described for the statistical analysis of data pertaining to complex state systems, based on the concept of reformulating the parameters describing the system as a hierarchy of interactions, and this method demonstrated on the analysis of spectroscopically monitored hemoglobin oxygen binding data [K. Imai, Biophys. Chem. 37 (1990) 197-210]. The concept of reformulation was first extended to state parameters other than delta G degree s, such as the extinction coefficients (epsilon s) associated with different ligation states during hemoglobin oxygen binding. The reformulated parameters are incrementally allowed to vary in the data fitting procedure, and the statistical significance of the added parameters tested by F and Kolmogorov-Smirnov tests. The result of this method is the minimal set of statistically significant parameters required to describe the data. The hierarchical nature of reformulated parameters allows the physical significance of the subset of statistically significant parameters to be discussed even when all reformulated terms may not be statistically significant. Applying this method to hemoglobin oxygen binding data with the reformulated Adair model demonstrated that at least two, and at most three, of the four reformulated Adair constants are statistically significant. A reformulated square model was found to give a statistically indistinguishable fit from the Adair model, with the statistically significant thermodynamic terms essentially those proposed by Linus Pauling in 1935. A change in delta epsilon with subsequent oxygen binding events was found to be significant in both models. These results are consistent with a model for hemoglobin oxygen binding where a subunit changes its conformation upon oxygen binding, and affects the conformation of adjacent subunits.
本文描述了一种用于复杂状态系统数据统计分析的方法,该方法基于将描述系统的参数重新表述为相互作用层次结构的概念,并通过对光谱监测的血红蛋白氧结合数据的分析进行了验证[K. Imai,生物物理化学37(1990)197 - 210]。重新表述的概念首先扩展到除吉布斯自由能变化(ΔG°s)之外的状态参数,例如与血红蛋白氧结合过程中不同配体状态相关的消光系数(εs)。在数据拟合过程中,逐步允许重新表述的参数变化,并通过F检验和柯尔莫哥洛夫 - 斯米尔诺夫检验来检验添加参数的统计显著性。该方法的结果是描述数据所需的最小一组具有统计显著性的参数。重新表述参数的层次性质使得即使所有重新表述的项可能不具有统计显著性,也能够讨论具有统计显著性的参数子集的物理意义。将此方法应用于重新表述的阿代尔模型的血红蛋白氧结合数据表明,四个重新表述的阿代尔常数中至少有两个且至多有三个具有统计显著性。发现重新表述的平方模型与阿代尔模型在统计上拟合效果无差异,具有统计显著性的热力学项基本上是莱纳斯·鲍林在1935年提出的那些。在两个模型中都发现,随着后续氧结合事件,消光系数变化(Δε)具有显著性。这些结果与血红蛋白氧结合模型一致,即一个亚基在氧结合时改变其构象,并影响相邻亚基的构象。