• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

冷冻电子显微镜图像的三维重建揭示了解旋酶DnaB与其加载伙伴DnaC之间的紧密复合物。

Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC.

作者信息

San Martin C, Radermacher M, Wolpensinger B, Engel A, Miles C S, Dixon N E, Carazo J M

机构信息

Centro Nacional de Biotecnología, Universidad Autónoma de Madrid, Cantoblanco, 28049, Madrid, Spain.

出版信息

Structure. 1998 Apr 15;6(4):501-9. doi: 10.1016/s0969-2126(98)00051-3.

DOI:10.1016/s0969-2126(98)00051-3
PMID:9562559
Abstract

BACKGROUND

DNA helicases play a fundamental role in all aspects of nucleic acid metabolism and defects in these enzymes have been implicated in a number of inherited human disorders. DnaB is the major replicative DNA helicase in Escherichia coli and has been used as a model system for studying the structure and function of hexameric helicases. The native protein is a hexamer of identical subunits, which in solution forms a complex with six molecules of the loading protein DnaC. DnaB is delivered from this complex onto the DNA template, with the subsequent release of DnaC. We report here the structures of the DnaB helicase hexamer and its complex with DnaC under a defined set of experimental conditions, as determined by three-dimensional cryoelectron microscopy. It was hoped that the structures would provide insight into the mechanisms of helicase activity.

RESULTS

The DnaB structure reveals that six DnaB monomers assemble as three asymmetric dimers to form a polar, ring-like hexamer. The hexamer has two faces, one displaying threefold and the other sixfold symmetry. The six DnaC protomers bind tightly to the sixfold face of the DnaB hexamer. This is the first report of a three-dimensional structure of a helicase obtained using cryoelectron microscopy, and the first report of the structure of a helicase in complex with a loading protein.

CONCLUSIONS

The structures of the DnaB helicase and its complex with DnaC reveal some interesting structural features relevant to helicase function and to the assembly of the two-protein complex. The results presented here provide a basis for a more complete understanding of the structure and function of these important proteins.

摘要

背景

DNA解旋酶在核酸代谢的各个方面都发挥着重要作用,这些酶的缺陷与多种人类遗传性疾病有关。DnaB是大肠杆菌中的主要复制性DNA解旋酶,已被用作研究六聚体解旋酶结构和功能的模型系统。天然蛋白质是由相同亚基组成的六聚体,在溶液中与六个加载蛋白DnaC分子形成复合物。DnaB从这个复合物传递到DNA模板上,随后释放DnaC。我们在此报告在一组特定实验条件下,通过三维冷冻电子显微镜确定的DnaB解旋酶六聚体及其与DnaC复合物的结构。希望这些结构能为解旋酶活性机制提供深入了解。

结果

DnaB结构显示六个DnaB单体组装成三个不对称二聚体,形成一个极性的环状六聚体。六聚体有两个面,一个显示三重对称性,另一个显示六重对称性。六个DnaC原体紧密结合到DnaB六聚体的六重面上。这是首次使用冷冻电子显微镜获得的解旋酶三维结构报告,也是首次解旋酶与加载蛋白复合物的结构报告。

结论

DnaB解旋酶及其与DnaC复合物的结构揭示了一些与解旋酶功能和双蛋白复合物组装相关的有趣结构特征。此处呈现的结果为更全面理解这些重要蛋白质的结构和功能提供了基础。

相似文献

1
Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC.冷冻电子显微镜图像的三维重建揭示了解旋酶DnaB与其加载伙伴DnaC之间的紧密复合物。
Structure. 1998 Apr 15;6(4):501-9. doi: 10.1016/s0969-2126(98)00051-3.
2
The DnaB.DnaC complex: a structure based on dimers assembled around an occluded channel.DnaB.DnaC复合物:一种基于围绕封闭通道组装的二聚体的结构。
EMBO J. 2001 Mar 15;20(6):1462-8. doi: 10.1093/emboj/20.6.1462.
3
Interactions of the Escherichia coli DnaB helicase hexamer with the replication factor the DnaC protein. Effect of nucleotide cofactors and the ssDNA on protein-protein interactions and the topology of the complex.大肠杆菌DnaB解旋酶六聚体与复制因子DnaC蛋白的相互作用。核苷酸辅因子和单链DNA对蛋白质-蛋白质相互作用及复合物拓扑结构的影响。
J Mol Biol. 2003 Jun 6;329(3):441-65. doi: 10.1016/s0022-2836(03)00435-2.
4
pH-controlled quaternary states of hexameric DnaB helicase.pH 控制的六聚体 DnaB 解旋酶的四级结构状态
J Mol Biol. 2000 Oct 27;303(3):383-93. doi: 10.1006/jmbi.2000.4132.
5
Multiple oligomeric forms of Escherichia coli DnaB helicase revealed by electrospray ionisation mass spectrometry.通过电喷雾电离质谱法揭示的大肠杆菌DnaB解旋酶的多种寡聚形式
Rapid Commun Mass Spectrom. 2007;21(2):132-40. doi: 10.1002/rcm.2818.
6
Quantitative analysis of binding of single-stranded DNA by Escherichia coli DnaB helicase and the DnaB x DnaC complex.大肠杆菌DnaB解旋酶及DnaB x DnaC复合物与单链DNA结合的定量分析。
Biochemistry. 2006 Sep 26;45(38):11505-13. doi: 10.1021/bi060118d.
7
Physical Basis for the Loading of a Bacterial Replicative Helicase onto DNA.DNA 上细菌复制解旋酶加载的物理基础。
Mol Cell. 2019 Apr 4;74(1):173-184.e4. doi: 10.1016/j.molcel.2019.01.023. Epub 2019 Feb 20.
8
Flexibility of the rings: structural asymmetry in the DnaB hexameric helicase.环的灵活性:DnaB六聚体解旋酶中的结构不对称性。
J Mol Biol. 2002 Aug 30;321(5):839-49. doi: 10.1016/s0022-2836(02)00711-8.
9
Crystal structure of the complex of the interaction domains of Escherichia coli DnaB helicase and DnaC helicase loader: structural basis implying a distortion-accumulation mechanism for the DnaB ring opening caused by DnaC binding.大肠杆菌 DnaB 解旋酶和 DnaC 解旋酶加载器相互作用域复合物的晶体结构:DnaC 结合引起的 DnaB 环打开的扭曲积累机制的结构基础。
J Biochem. 2020 Jan 1;167(1):1-14. doi: 10.1093/jb/mvz087.
10
Structural insight into replicative helicase loading in Escherichia coli.大肠杆菌复制解旋酶加载的结构见解。
J Biochem. 2022 May 27;171(6):605-607. doi: 10.1093/jb/mvac023.

引用本文的文献

1
Diverse Mechanisms of Helicase Loading during DNA Replication Initiation in Bacteria.细菌中 DNA 复制起始时解旋酶加载的多种机制。
J Bacteriol. 2023 Apr 25;205(4):e0048722. doi: 10.1128/jb.00487-22. Epub 2023 Mar 6.
2
A structural view of bacterial DNA replication.细菌 DNA 复制的结构视图。
Protein Sci. 2019 Jun;28(6):990-1004. doi: 10.1002/pro.3615. Epub 2019 Apr 17.
3
The Macromolecular Machines that Duplicate the Escherichia coli Chromosome as Targets for Drug Discovery.作为药物发现靶点的复制大肠杆菌染色体的大分子机器
Antibiotics (Basel). 2018 Mar 14;7(1):23. doi: 10.3390/antibiotics7010023.
4
DnaC, the indispensable companion of DnaB helicase, controls the accessibility of DnaB helicase by primase.DnaC 是 DnaB 解旋酶不可或缺的伴侣,通过引物酶控制 DnaB 解旋酶的可及性。
J Biol Chem. 2017 Dec 22;292(51):20871-20882. doi: 10.1074/jbc.M117.807644. Epub 2017 Oct 25.
5
Lambda gpP-DnaB Helicase Sequestration and gpP-RpoB Associated Effects: On Screens for Auxotrophs, Selection for Rif(R), Toxicity, Mutagenicity, Plasmid Curing.λ gpP-DnaB解旋酶隔离及gpP-RpoB相关效应:在营养缺陷型筛选、利福平抗性(Rif(R))选择、毒性、诱变性、质粒消除方面的研究
Viruses. 2016 Jun 22;8(6):172. doi: 10.3390/v8060172.
6
Biochemical Characterization of the Human Mitochondrial Replicative Twinkle Helicase: SUBSTRATE SPECIFICITY, DNA BRANCH MIGRATION, AND ABILITY TO OVERCOME BLOCKADES TO DNA UNWINDING.人类线粒体复制性闪烁解旋酶的生化特性:底物特异性、DNA分支迁移以及克服DNA解旋障碍的能力。
J Biol Chem. 2016 Jul 1;291(27):14324-14339. doi: 10.1074/jbc.M115.712026. Epub 2016 May 11.
7
DNA Helicases.DNA解旋酶
EcoSal Plus. 2010 Sep;4(1). doi: 10.1128/ecosalplus.4.4.8.
8
Loading strategies of ring-shaped nucleic acid translocases and helicases.环状核酸转位酶和解旋酶的加载策略。
Curr Opin Struct Biol. 2014 Apr;25:16-24. doi: 10.1016/j.sbi.2013.11.006. Epub 2013 Dec 18.
9
Nucleotide and partner-protein control of bacterial replicative helicase structure and function.核苷酸和伴侣蛋白对细菌复制解旋酶结构和功能的调控。
Mol Cell. 2013 Dec 26;52(6):844-54. doi: 10.1016/j.molcel.2013.11.016.
10
The bacterial DnaC helicase loader is a DnaB ring breaker.细菌 DnaC 解旋酶加载器是 DnaB 环的破坏者。
Cell. 2013 Apr 11;153(2):438-48. doi: 10.1016/j.cell.2013.03.006. Epub 2013 Apr 4.