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嗜碱假单胞菌JS45硝基苯降解途径中的一种新型2-氨基粘康酸脱氨酶。

A novel 2-aminomuconate deaminase in the nitrobenzene degradation pathway of Pseudomonas pseudoalcaligenes JS45.

作者信息

He Z, Spain J C

机构信息

Air Force Research Laboratory, Tyndall Air Force Base, Florida 32403, USA.

出版信息

J Bacteriol. 1998 May;180(9):2502-6. doi: 10.1128/JB.180.9.2502-2506.1998.

DOI:10.1128/JB.180.9.2502-2506.1998
PMID:9573204
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC107194/
Abstract

2-Aminomuconate, an intermediate in the metabolism of tryptophan in mammals, is also an intermediate in the biodegradation of nitrobenzene by Pseudomonas pseudoalcaligenes JS45. Strain JS45 hydrolyzes 2-aminomuconate to 4-oxalocrotonic acid, with the release of ammonia, which serves as the nitrogen source for growth of the microorganism. As an initial step in studying the novel deamination mechanism, we report here the purification and some properties of 2-aminomuconate deaminase. The purified enzyme migrates as a single band with a molecular mass of 16.6 kDa in 15% polyacrylamide gel electrophoresis under denaturing conditions. The estimated molecular mass of the native enzyme was 100 kDa by gel filtration and 4 to 20% gradient nondenaturing polyacrylamide gel electrophoresis, suggesting that the enzyme consists of six identical subunits. The enzyme was stable at room temperature and exhibited optimal activity at pH 6.6. The Km for 2-aminomuconate was approximately 67 microM, and the Vmax was 125 micromol x min(-1) x mg(-1). The N-terminal amino acid sequence of the enzyme did not show any significant similarity to any sequence in the databases. The purified enzyme converted 2-aminomuconate directly to 4-oxalocrotonate, rather than 2-hydroxymuconate, which suggests that the deamination was carried out via an imine intermediate.

摘要

2-氨基粘康酸是哺乳动物色氨酸代谢的中间产物,也是假产碱假单胞菌JS45对硝基苯生物降解的中间产物。菌株JS45将2-氨基粘康酸水解为4-草酰巴豆酸,并释放出氨,氨作为微生物生长的氮源。作为研究这种新型脱氨机制的第一步,我们在此报告2-氨基粘康酸脱氨酶的纯化及一些性质。在变性条件下,纯化后的酶在15%聚丙烯酰胺凝胶电泳中迁移为一条分子量为16.6 kDa的单带。通过凝胶过滤和4%至20%梯度非变性聚丙烯酰胺凝胶电泳估计天然酶的分子量为100 kDa,这表明该酶由六个相同的亚基组成。该酶在室温下稳定,在pH 6.6时表现出最佳活性。2-氨基粘康酸的Km约为67 μM,Vmax为125 μmol·min⁻¹·mg⁻¹。该酶的N端氨基酸序列与数据库中的任何序列均无明显相似性。纯化后的酶将2-氨基粘康酸直接转化为4-草酰巴豆酸,而不是2-羟基粘康酸,这表明脱氨是通过亚胺中间体进行的。

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A novel 2-aminomuconate deaminase in the nitrobenzene degradation pathway of Pseudomonas pseudoalcaligenes JS45.嗜碱假单胞菌JS45硝基苯降解途径中的一种新型2-氨基粘康酸脱氨酶。
J Bacteriol. 1998 May;180(9):2502-6. doi: 10.1128/JB.180.9.2502-2506.1998.
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本文引用的文献

1
THE BACTERIAL DEGRADATION OF CATECHOL.儿茶酚的细菌降解
Biochem J. 1965 May;95(2):466-74. doi: 10.1042/bj0950466.
2
STUDIES ON THE METABOLISM OF THE BENZENE RING OF TRYPTOPHAN IN MAMMALIAN TISSUES. II. ENZYMIC FORMATION OF ALPHA-AMINOMUCONIC ACID FROM 3-HYDROXYANTHRANILIC ACID.哺乳动物组织中色氨酸苯环代谢的研究。II. 由3-羟基邻氨基苯甲酸酶促形成α-氨基粘康酸。
J Biol Chem. 1965 Feb;240:740-9.
3
Studies of the catabolic pathway of degradation of nitrobenzene by Pseudomonas pseudoalcaligenes JS45: removal of the amino group from 2-aminomuconic semialdehyde.产碱假单胞菌JS45降解硝基苯的分解代谢途径研究:从2-氨基粘康酸半醛中去除氨基。
Appl Environ Microbiol. 1997 Dec;63(12):4839-43. doi: 10.1128/aem.63.12.4839-4843.1997.
4
Active site plasticity in D-amino acid oxidase: a crystallographic analysis.D-氨基酸氧化酶的活性位点可塑性:晶体学分析
Biochemistry. 1997 May 13;36(19):5853-60. doi: 10.1021/bi9630570.
5
Enzymatic ketonization of 2-hydroxymuconate: specificity and mechanism investigated by the crystal structures of two isomerases.2-羟基粘康酸的酶促酮化反应:通过两种异构酶的晶体结构研究其特异性和机制
Biochemistry. 1996 Jan 23;35(3):792-802. doi: 10.1021/bi951732k.
6
Degradation of nitrobenzene by a Pseudomonas pseudoalcaligenes.一株类产碱假单胞菌对硝基苯的降解作用
Appl Environ Microbiol. 1993 Aug;59(8):2520-5. doi: 10.1128/aem.59.8.2520-2525.1993.
7
Bacterial metabolism of 5-aminosalicylic acid: enzymic conversion to L-malate, pyruvate and ammonia.5-氨基水杨酸的细菌代谢:酶促转化为L-苹果酸、丙酮酸和氨。
J Gen Microbiol. 1993 May;139(5):1019-25. doi: 10.1099/00221287-139-5-1019.
8
Preliminary crystallographic analysis of 4-oxalocrotonate tautomerase reveals the oligomeric structure of the enzyme.4-草酰巴豆酸互变异构酶的初步晶体学分析揭示了该酶的寡聚结构。
J Mol Biol. 1994 Nov 4;243(4):799-801. doi: 10.1016/0022-2836(94)90050-7.
9
The meta cleavage of catechol by Azotobacter species. 4-Oxalocrotonate pathway.固氮菌属对儿茶酚的间位裂解。4-草酰巴豆酸途径。
Eur J Biochem. 1971 Jun 11;20(3):400-13. doi: 10.1111/j.1432-1033.1971.tb01406.x.
10
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida.物理关联的酶产生并代谢2-羟基-2,4-二烯酸酯,这是恶臭假单胞菌中通过间位裂解途径进行儿茶酚代谢时形成的一种化学性质不稳定的中间体。
J Bacteriol. 1989 Nov;171(11):6251-8. doi: 10.1128/jb.171.11.6251-6258.1989.