• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自假单胞菌属AP-3的2-氨基酚代谢相关基因的完整核苷酸序列及功能分析。

Complete nucleotide sequence and functional analysis of the genes for 2-aminophenol metabolism from Pseudomonas sp. AP-3.

作者信息

Takenaka S, Murakami S, Kim Y J, Aoki K

机构信息

Department of Biofunctional Chemistry, Faculty of Agriculture, Graduate School of Science and Technology, Kobe University, Rokko, Japan.

出版信息

Arch Microbiol. 2000 Oct;174(4):265-72. doi: 10.1007/s002030000203.

DOI:10.1007/s002030000203
PMID:11081795
Abstract

A 13.9-kb region, which contained the 2-aminophenol 1,6-dioxygenase genes (amnBA) reported before, was cloned from the 2-aminophenol-assimilating bacterium Pseudomonas sp. AP-3. The complete nucleotide sequence of this region was determined and six genes were found downstream of amnBA. The eight genes together were designated amnBACFEDHG. Each gene was similar to the corresponding gene operating in the meta-cleavage pathway, except for amnB, amnA, and amnD. The four 2-aminophenol-metabolizing enzymes, 2-aminomuconic 6-semialdehyde dehydrogenase, 2-aminomuconate deaminase, 4-oxalocrotonate decarboxylase, and 2-oxopent-4-enoate hydratase, were purified and characterized. NH2-terminal amino acid sequences of each purified enzyme agreed with those deduced from amnC, amnF, amnE, and amnD, respectively. These genes were therefore assigned as the genes encoding these respective proteins. The tight clustering of the amn genes, which were all transcribed in the same direction, raised the possibility that these genes formed a single operon. The organization of the amn genes was entirely different from that of the atd, dmp, and xyl genes reported in the meta-cleavage pathway, although these latter genes clustered similarly.

摘要

从能同化2-氨基酚的假单胞菌属AP-3菌株中克隆出一个13.9 kb的区域,该区域包含之前报道的2-氨基酚1,6 -双加氧酶基因(amnBA)。测定了该区域的完整核苷酸序列,在amnBA下游发现了6个基因。这8个基因合称为amnBACFEDHG。除了amnB、amnA和amnD外,每个基因都与间位裂解途径中起作用的相应基因相似。对4种2-氨基酚代谢酶,即2-氨基粘康酸6-半醛脱氢酶、2-氨基粘康酸脱氨酶、4-草酰巴豆酸脱羧酶和2-氧代戊-4-烯酸水合酶进行了纯化和特性鉴定。每种纯化酶的NH2末端氨基酸序列分别与从amnC、amnF、amnE和amnD推导的序列一致。因此,这些基因被确定为编码这些相应蛋白质的基因。amn基因紧密成簇,且均按相同方向转录,这增加了这些基因形成单个操纵子的可能性。amn基因的组织形式与间位裂解途径中报道的atd、dmp和xyl基因完全不同,尽管后几种基因也类似地成簇。

相似文献

1
Complete nucleotide sequence and functional analysis of the genes for 2-aminophenol metabolism from Pseudomonas sp. AP-3.来自假单胞菌属AP-3的2-氨基酚代谢相关基因的完整核苷酸序列及功能分析。
Arch Microbiol. 2000 Oct;174(4):265-72. doi: 10.1007/s002030000203.
2
Genetic and biochemical comparison of 2-aminophenol 1,6-dioxygenase of Pseudomonas pseudoalcaligenes JS45 to meta-cleavage dioxygenases: divergent evolution of 2-aminophenol meta-cleavage pathway.产碱假单胞菌JS45的2-氨基苯酚1,6-双加氧酶与间位裂解双加氧酶的遗传和生化比较:2-氨基苯酚间位裂解途径的趋异进化
Arch Microbiol. 1999 Nov;172(5):330-9. doi: 10.1007/s002030050787.
3
Novel genes encoding 2-aminophenol 1,6-dioxygenase from Pseudomonas species AP-3 growing on 2-aminophenol and catalytic properties of the purified enzyme.
J Biol Chem. 1997 Jun 6;272(23):14727-32. doi: 10.1074/jbc.272.23.14727.
4
p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization of DNA carrying the cmt operon.恶臭假单胞菌Fl中的对异丙基苯甲酸分解代谢途径:携带cmt操纵子的DNA的克隆与特性分析
J Bacteriol. 1996 Mar;178(5):1351-62. doi: 10.1128/jb.178.5.1351-1362.1996.
5
Prokaryotic homologs of the eukaryotic 3-hydroxyanthranilate 3,4-dioxygenase and 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase in the 2-nitrobenzoate degradation pathway of Pseudomonas fluorescens strain KU-7.荧光假单胞菌菌株KU-7的2-硝基苯甲酸降解途径中真核生物3-羟基邻氨基苯甲酸3,4-双加氧酶和2-氨基-3-羧基粘康酸-6-半醛脱羧酶的原核生物同源物。
Appl Environ Microbiol. 2003 Mar;69(3):1564-72. doi: 10.1128/AEM.69.3.1564-1572.2003.
6
Purification, characterization, and sequence analysis of 2-aminomuconic 6-semialdehyde dehydrogenase from Pseudomonas pseudoalcaligenes JS45.嗜碱假单胞菌JS45中2-氨基粘康酸6-半醛脱氢酶的纯化、表征及序列分析
J Bacteriol. 1998 Sep;180(17):4591-5. doi: 10.1128/JB.180.17.4591-4595.1998.
7
Nucleotide sequence of the Pseudomonas sp. DJ77 phnG gene encoding 2-hydroxymuconic semialdehyde dehydrogenase.编码2-羟基粘康酸半醛脱氢酶的假单胞菌属DJ77 phnG基因的核苷酸序列。
Biochem Biophys Res Commun. 1997 Nov 7;240(1):41-5. doi: 10.1006/bbrc.1997.7595.
8
The tetrameric assembly of 2-aminomuconic 6-semialdehyde dehydrogenase is a functional requirement of cofactor NAD binding.2-氨基粘康酸6-半醛脱氢酶的四聚体组装是辅因子NAD结合的功能需求。
Environ Microbiol. 2022 Jul;24(7):2994-3012. doi: 10.1111/1462-2920.15840. Epub 2021 Nov 22.
9
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida.物理关联的酶产生并代谢2-羟基-2,4-二烯酸酯,这是恶臭假单胞菌中通过间位裂解途径进行儿茶酚代谢时形成的一种化学性质不稳定的中间体。
J Bacteriol. 1989 Nov;171(11):6251-8. doi: 10.1128/jb.171.11.6251-6258.1989.
10
Microorganisms degrading chlorobenzene via a meta-cleavage pathway harbor highly similar chlorocatechol 2,3-dioxygenase-encoding gene clusters.通过间位裂解途径降解氯苯的微生物含有高度相似的编码氯儿茶酚2,3-双加氧酶的基因簇。
Arch Microbiol. 2004 Oct;182(2-3):147-56. doi: 10.1007/s00203-004-0681-5. Epub 2004 Aug 31.

引用本文的文献

1
Modulators of a robust and efficient metabolism: Perspective and insights from the Rid superfamily of proteins.调节强健高效代谢的分子:来自 Rid 超家族蛋白的观点和见解。
Adv Microb Physiol. 2023;83:117-179. doi: 10.1016/bs.ampbs.2023.04.001. Epub 2023 Apr 29.
2
Characterization of a novel aromatic substrate-processing microcompartment in Actinobacteria.放线菌中新型芳香族底物加工微隔间的特性研究。
mBio. 2023 Aug 31;14(4):e0121623. doi: 10.1128/mbio.01216-23. Epub 2023 Jul 18.
3
RidA Proteins Protect against Metabolic Damage by Reactive Intermediates.
RidA 蛋白可防止代谢物损伤活性中间体。
Microbiol Mol Biol Rev. 2020 Jul 15;84(3). doi: 10.1128/MMBR.00024-20. Print 2020 Aug 19.
4
Toward Biorecycling: Isolation of a Soil Bacterium That Grows on a Polyurethane Oligomer and Monomer.迈向生物循环利用:一种能在聚氨酯低聚物和单体上生长的土壤细菌的分离
Front Microbiol. 2020 Mar 27;11:404. doi: 10.3389/fmicb.2020.00404. eCollection 2020.
5
A Unique Homo-Hexameric Structure of 2-Aminomuconate Deaminase in the Bacterium .细菌中2-氨基粘康酸脱氨酶的独特同源六聚体结构
Front Microbiol. 2019 Sep 6;10:2079. doi: 10.3389/fmicb.2019.02079. eCollection 2019.
6
Der f 34, a Novel Major House Dust Mite Allergen Belonging to a Highly Conserved Rid/YjgF/YER057c/UK114 Family of Imine Deaminases.Der f 34,一种新型主要屋尘螨变应原,属于高度保守的亚胺脱氨酶Rid/YjgF/YER057c/UK114家族。
J Biol Chem. 2016 Oct 7;291(41):21607-21615. doi: 10.1074/jbc.M116.728006. Epub 2016 Aug 18.
7
Structural and Mechanistic Insights into the Pseudomonas fluorescens 2-Nitrobenzoate 2-Nitroreductase NbaA.荧光假单胞菌2-硝基苯甲酸2-硝基还原酶NbaA的结构与作用机制解析
Appl Environ Microbiol. 2015 Aug;81(15):5266-77. doi: 10.1128/AEM.01289-15. Epub 2015 May 29.
8
Genomic and experimental evidence for multiple metabolic functions in the RidA/YjgF/YER057c/UK114 (Rid) protein family.RidA/YjgF/YER057c/UK114(Rid)蛋白家族多种代谢功能的基因组及实验证据。
BMC Genomics. 2015 May 15;16(1):382. doi: 10.1186/s12864-015-1584-3.
9
Arabidopsis and maize RidA proteins preempt reactive enamine/imine damage to branched-chain amino acid biosynthesis in plastids.拟南芥和玉米的RidA蛋白可预防质体中支链氨基酸生物合成过程中的反应性烯胺/亚胺损伤。
Plant Cell. 2014 Jul;26(7):3010-22. doi: 10.1105/tpc.114.126854. Epub 2014 Jul 28.
10
Crystallization and preliminary X-ray study of the deaminase AmnE from Pseudomonas sp. AP-3.来自假单胞菌AP-3的脱氨酶AmnE的结晶及初步X射线研究。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Jul;69(Pt 7):812-4. doi: 10.1107/S1744309113016709. Epub 2013 Jun 30.