• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

纤连蛋白EIIIB外显子的可变剪接取决于特定的TGCATG重复序列。

Alternative splicing of the fibronectin EIIIB exon depends on specific TGCATG repeats.

作者信息

Lim L P, Sharp P A

机构信息

Center for Cancer Research and Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

出版信息

Mol Cell Biol. 1998 Jul;18(7):3900-6. doi: 10.1128/MCB.18.7.3900.

DOI:10.1128/MCB.18.7.3900
PMID:9632774
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC108974/
Abstract

The fibronectin EIIIB exon is alternatively spliced in a cell-type-specific manner, and TGCATG repeats in the intron downstream of EIIIB have been implicated in this regulation. Analysis of the intron sequence from several vertebrates shows that the pattern of repeats in the 3' half of the intron is evolutionarily conserved. Point mutations in certain highly conserved repeats greatly reduce EIIIB inclusion, suggesting that a multicomponent complex may recognize the repeats. Expression of the SR protein SRp40, SRp20, or ASF/SF2 stimulates EIIIB inclusion. Studies of the interplay between mutations in the repeats and SRp40-stimulated inclusion suggest that the repeats are recognized in many, if not all, cell types, and that EIIIB inclusion may be regulated by quantitative changes in multiple factors.

摘要

纤连蛋白EIIIB外显子以细胞类型特异性方式进行可变剪接,并且EIIIB下游内含子中的TGCATG重复序列与这种调控有关。对几种脊椎动物内含子序列的分析表明,内含子3'端一半的重复模式在进化上是保守的。某些高度保守重复序列中的点突变极大地减少了EIIIB的包含,这表明一个多组分复合物可能识别这些重复序列。SR蛋白SRp40、SRp20或ASF/SF2的表达刺激EIIIB的包含。对重复序列突变与SRp40刺激的包含之间相互作用的研究表明,这些重复序列在许多(如果不是所有)细胞类型中都能被识别,并且EIIIB的包含可能受多种因素定量变化的调控。

相似文献

1
Alternative splicing of the fibronectin EIIIB exon depends on specific TGCATG repeats.纤连蛋白EIIIB外显子的可变剪接取决于特定的TGCATG重复序列。
Mol Cell Biol. 1998 Jul;18(7):3900-6. doi: 10.1128/MCB.18.7.3900.
2
Elements regulating an alternatively spliced exon of the rat fibronectin gene.调控大鼠纤连蛋白基因可变剪接外显子的元件。
Mol Cell Biol. 1993 Sep;13(9):5301-14. doi: 10.1128/mcb.13.9.5301-5314.1993.
3
Regulation of alternative pre-mRNA splicing by a novel repeated hexanucleotide element.一种新型重复六核苷酸元件对可变前体mRNA剪接的调控
Genes Dev. 1994 Jul 1;8(13):1561-74. doi: 10.1101/gad.8.13.1561.
4
In vitro splicing of fibronectin pre-mRNAs.纤连蛋白前体信使核糖核酸的体外剪接
Nucleic Acids Res. 1990 Jul 25;18(14):4089-97. doi: 10.1093/nar/18.14.4089.
5
HRS/SRp40-mediated inclusion of the fibronectin EIIIB exon, a possible cause of increased EIIIB expression in proliferating liver.HRS/SRp40介导的纤连蛋白EIIIB外显子包含,这可能是增殖性肝脏中EIIIB表达增加的一个原因。
Mol Cell Biol. 1997 Jul;17(7):4096-104. doi: 10.1128/MCB.17.7.4096.
6
Alternative splicing of fibronectin mRNAs in chondrosarcoma cells: role of far upstream intron sequences.软骨肉瘤细胞中纤连蛋白mRNA的可变剪接:远上游内含子序列的作用
J Cell Biochem. 2003 Nov 1;90(4):709-18. doi: 10.1002/jcb.10687.
7
Novel exonic elements that modulate splicing of the human fibronectin EDA exon.调控人纤连蛋白EDA外显子剪接的新型外显子元件。
J Biol Chem. 1997 Dec 26;272(52):33394-401. doi: 10.1074/jbc.272.52.33394.
8
Multiple sites of alternative splicing of the rat fibronectin gene transcript.大鼠纤连蛋白基因转录本的多个可变剪接位点。
EMBO J. 1987 Sep;6(9):2573-80. doi: 10.1002/j.1460-2075.1987.tb02547.x.
9
Expression of the alternatively spliced EIIIB segment of fibronectin.纤连蛋白可变剪接的EIIIB片段的表达
Cell Adhes Commun. 1995 Feb;3(1):67-89. doi: 10.3109/15419069509081278.
10
The alternatively spliced domains EIIIB and EIIIA of human fibronectin affect cell adhesion and spreading.人纤连蛋白可变剪接结构域EIIIB和EIIIA影响细胞黏附和铺展。
J Cell Sci. 1997 Sep;110 ( Pt 18):2271-80. doi: 10.1242/jcs.110.18.2271.

引用本文的文献

1
FN1 shapes the behavior of papillary thyroid carcinoma through alternative splicing of EDB region.纤连蛋白1(FN1)通过EDB区域的可变剪接塑造甲状腺乳头状癌的行为。
Sci Rep. 2025 Jan 2;15(1):327. doi: 10.1038/s41598-024-83369-5.
2
Circular RNA Gtdc1 Protects Against Offspring Osteoarthritis Induced by Prenatal Prednisone Exposure by Regulating SRSF1-Fn1 Signaling.环状 RNA Gtdc1 通过调控 SRSF1-Fn1 信号通路保护孕期地塞米松暴露致子代骨关节炎。
Adv Sci (Weinh). 2024 May;11(20):e2307442. doi: 10.1002/advs.202307442. Epub 2024 Mar 22.
3
Formation of an invasion-permissive matrix requires TGFβ/SNAIL1-regulated alternative splicing of fibronectin.形成侵袭性允许基质需要 TGFβ/SNAIL1 调节的纤连蛋白的选择性剪接。
Breast Cancer Res. 2023 Nov 14;25(1):143. doi: 10.1186/s13058-023-01736-y.
4
Splicing regulation of GFPT1 muscle-specific isoform and its roles in glucose metabolisms and neuromuscular junction.GFPT1肌肉特异性同工型的剪接调控及其在葡萄糖代谢和神经肌肉接头中的作用。
iScience. 2023 Aug 26;26(10):107746. doi: 10.1016/j.isci.2023.107746. eCollection 2023 Oct 20.
5
Native functions of short tandem repeats.短串联重复序列的固有功能。
Elife. 2023 Mar 20;12:e84043. doi: 10.7554/eLife.84043.
6
Identification of splice regulators of fibronectin-EIIIA and EIIIB by direct measurement of exon usage in a flow-cytometry based CRISPR screen.通过基于流式细胞术的 CRISPR 筛选中直接测量外显子使用情况鉴定纤连蛋白-EIIIA 和 EIIIB 的剪接调控因子。
Sci Rep. 2021 Oct 6;11(1):19835. doi: 10.1038/s41598-021-99079-1.
7
Construction and evaluation of an adenoviral vector for the liver-specific expression of the serine/arginine-rich splicing factor, SRSF3.用于肝脏特异性表达富含丝氨酸/精氨酸剪接因子SRSF3的腺病毒载体的构建与评价
Plasmid. 2015 Nov;82:1-9. doi: 10.1016/j.plasmid.2015.07.004. Epub 2015 Aug 1.
8
Tissue stiffness regulates serine/arginine-rich protein-mediated splicing of the extra domain B-fibronectin isoform in tumors.组织硬度调节肿瘤中富含丝氨酸/精氨酸蛋白介导的额外结构域B纤连蛋白异构体的剪接。
Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8314-9. doi: 10.1073/pnas.1505421112. Epub 2015 Jun 23.
9
Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors.mRNA 3'末端形成因子对可变内部外显子使用的全局促进作用。
Mol Cell. 2015 Jun 4;58(5):819-31. doi: 10.1016/j.molcel.2015.03.016. Epub 2015 Apr 23.
10
RNA Bind-n-Seq: quantitative assessment of the sequence and structural binding specificity of RNA binding proteins.RNA 结合蛋白结合特异性测序(RNA Bind-n-Seq):对 RNA 结合蛋白的序列和结构结合特异性的定量评估。
Mol Cell. 2014 Jun 5;54(5):887-900. doi: 10.1016/j.molcel.2014.04.016. Epub 2014 May 15.

本文引用的文献

1
Control of alternative pre-mRNA splicing by distributed pentameric repeats.通过分布式五聚体重复序列对可变前体mRNA剪接的调控
Proc Natl Acad Sci U S A. 1997 Nov 11;94(23):12343-7. doi: 10.1073/pnas.94.23.12343.
2
A complex intronic splicing enhancer from the c-src pre-mRNA activates inclusion of a heterologous exon.来自c-src前体mRNA的一个复杂内含子剪接增强子激活了一个异源外显子的包含。
Mol Cell Biol. 1997 Nov;17(11):6537-45. doi: 10.1128/MCB.17.11.6537.
3
Multiple interdependent sequence elements control splicing of a fibroblast growth factor receptor 2 alternative exon.多个相互依赖的序列元件控制成纤维细胞生长因子受体2可变外显子的剪接。
Mol Cell Biol. 1997 Sep;17(9):5106-16. doi: 10.1128/MCB.17.9.5106.
4
G triplets located throughout a class of small vertebrate introns enforce intron borders and regulate splice site selection.分布在一类小型脊椎动物内含子中的G三联体决定内含子边界并调节剪接位点选择。
Mol Cell Biol. 1997 Aug;17(8):4562-71. doi: 10.1128/MCB.17.8.4562.
5
HRS/SRp40-mediated inclusion of the fibronectin EIIIB exon, a possible cause of increased EIIIB expression in proliferating liver.HRS/SRp40介导的纤连蛋白EIIIB外显子包含,这可能是增殖性肝脏中EIIIB表达增加的一个原因。
Mol Cell Biol. 1997 Jul;17(7):4096-104. doi: 10.1128/MCB.17.7.4096.
6
Common themes in the function of transcription and splicing enhancers.转录增强子和剪接增强子功能的共同主题。
Curr Opin Cell Biol. 1997 Jun;9(3):350-7. doi: 10.1016/s0955-0674(97)80007-5.
7
Regulated expression and RNA processing of transcripts from the Srp20 splicing factor gene during the cell cycle.细胞周期中Srp20剪接因子基因转录本的调控表达与RNA加工
Mol Cell Biol. 1997 Jun;17(6):3116-24. doi: 10.1128/MCB.17.6.3116.
8
A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer.一种新的调控蛋白KSRP通过内含子剪接增强子介导外显子包含。
Genes Dev. 1997 Apr 15;11(8):1023-36. doi: 10.1101/gad.11.8.1023.
9
Sequence-specific RNA binding by an SR protein requires RS domain phosphorylation: creation of an SRp40-specific splicing enhancer.SR蛋白与序列特异性RNA的结合需要RS结构域磷酸化:创建一个SRp40特异性剪接增强子。
Proc Natl Acad Sci U S A. 1997 Feb 18;94(4):1148-53. doi: 10.1073/pnas.94.4.1148.
10
The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation.聚腺苷酸化因子CstF-64在B细胞分化过程中调节IgM重链前体mRNA的可变加工。
Cell. 1996 Nov 29;87(5):941-52. doi: 10.1016/s0092-8674(00)82000-0.