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一种类似短分散元件(SINE)的元件Cp1位点特异性插入到苍白摇蚊着丝粒串联重复序列中。

Site-specific insertion of a SINE-like element, Cp1, into centromeric tandem repeats from Chironomus pallidivittatus.

作者信息

Liao C, Rovira C, He H, Edström J E

机构信息

Department of Genetics, Lund University, Sölvegatan 29 S-22362 Lund, Sweden.

出版信息

J Mol Biol. 1998 Jul 31;280(5):811-21. doi: 10.1006/jmbi.1998.1896.

DOI:10.1006/jmbi.1998.1896
PMID:9701546
Abstract

A SINE-like dispersed element, Cp1, from the dipteran Chironomus pallidivittatus was found to show site-specific insertion into two different centromeric tandem repeats. The insertions result in identical target site duplications of nine base-pairs. In contrast, extracentromeric Cp1 elements, which are polymorphic and degenerate, are previously known to be surrounded by different target site duplications. The intracentromeric Cp1 is uniform in structure and contains a single pol III unit, upstream of which 87 bp arms of a palindrome surround a 103 bp unique sequence. The numbers of Cp1 elements per centromere were determined in microdissected material and were found to be in the range of five to ten units per centromere. The well-defined insertion properties, correlated to chromosomal localization, suggest that Cp1 is likely to be a component of importance for the centromere. Similarities of Cp1 and its parts to functionally identified centromeres in Saccharomyces cerevisiae and Schizosaccharomyces pombe are discussed.

摘要

在双翅目昆虫苍白摇蚊中发现了一种类似SINE的分散元件Cp1,它能位点特异性插入到两种不同的着丝粒串联重复序列中。这些插入导致了相同的9个碱基对的靶位点重复。相比之下,着丝粒外的Cp1元件具有多态性且已退化,此前已知其周围有不同的靶位点重复序列。着丝粒内的Cp1结构一致,包含一个单一的聚合酶III单元,在其上游,一个回文结构的87 bp臂围绕着一个103 bp的独特序列。通过显微切割材料确定了每个着丝粒中Cp1元件的数量,发现每个着丝粒中Cp1元件的数量在5到10个单位之间。与染色体定位相关的明确插入特性表明,Cp1可能是着丝粒的重要组成部分。文中还讨论了Cp1及其部分与酿酒酵母和粟酒裂殖酵母中功能已明确的着丝粒的相似性。

相似文献

1
Site-specific insertion of a SINE-like element, Cp1, into centromeric tandem repeats from Chironomus pallidivittatus.一种类似短分散元件(SINE)的元件Cp1位点特异性插入到苍白摇蚊着丝粒串联重复序列中。
J Mol Biol. 1998 Jul 31;280(5):811-21. doi: 10.1006/jmbi.1998.1896.
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Polymorphic SINEs in chironomids with DNA derived from the R2 insertion site.摇蚊中具有源自R2插入位点DNA的多态性短散在重复序列。
J Mol Biol. 1995 Jan 6;245(1):34-42. doi: 10.1006/jmbi.1994.0004.
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Centromere 3 specific tandem repeat from Chironomus pallidivittatus.来自苍白摇蚊的3号着丝粒特异性串联重复序列。
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Centromeric polymerase III transcription units in Chironomus pallidivittatus.苍白摇蚊中的着丝粒聚合酶III转录单元
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Interspersed centromeric element with a CENP-B box-like motif in Chironomus pallidivittatus.在苍白摇蚊中具有类似着丝粒蛋白B框基序的散布着丝粒元件。
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Telomere terminating with centromere-specific repeats is closely associated with a transposon derived gene in Chironomus pallidivittatus.以着丝粒特异性重复序列终止的端粒与苍白摇蚊中一个转座子衍生基因密切相关。
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A repetitive DNA sequence associated with the centromeres of Chironomus pallidivittatus.一种与苍白摇蚊着丝粒相关的重复DNA序列。
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Subrepeats result from regional DNA sequence conservation in tandem repeats in Chironomus telomeres.亚重复序列源自摇蚊端粒串联重复序列中的区域DNA序列保守性。
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[Molecular-cytogenetic characteristics of B-chromosomes in chironomid (Diptera, Chironomidae)].[摇蚊(双翅目,摇蚊科)B染色体的分子细胞遗传学特征]
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Nucleic Acids Res. 1998 Sep 15;26(18):4168-72. doi: 10.1093/nar/26.18.4168.