化学自养细菌与深海蛤蜊的协同物种形成。
Cospeciation of chemoautotrophic bacteria and deep sea clams.
作者信息
Peek A S, Feldman R A, Lutz R A, Vrijenhoek R C
机构信息
Center for Theoretical and Applied Genetics and Institute of Marine and Coastal Sciences, 71 Dudley Road, Rutgers University, New Brunswick, NJ 08901-8521, USA.
出版信息
Proc Natl Acad Sci U S A. 1998 Aug 18;95(17):9962-6. doi: 10.1073/pnas.95.17.9962.
Abstract
Vesicomyid clams depend entirely on sulfur-oxidizing endosymbiotic bacteria for their nutriment. Endosymbionts that are transmitted cytoplasmically through eggs, such as these, should exhibit a phylogenetic pattern that closely parallels the phylogeny of host mitochondrial genes. Such parallel patterns are rarely observed, however, because they are obscured easily by small amounts of horizontal symbiont transmission or occasional host switching. The present symbiont genealogy, based on bacterial small subunit (16S) rDNA sequences, was closely congruent with the host genealogy, based on clam mitochondrial cytochrome oxidase subunit I and large subunit (16S) rDNA sequences. This phylogenetic evidence supports the hypothesis of cospeciation and a long term association between the participants in this symbiosis.
摘要
囊蛤完全依赖硫氧化内共生细菌获取营养。像这样通过卵子进行细胞质遗传的内共生体，其系统发育模式应与宿主线粒体基因的系统发育密切平行。然而，这种平行模式很少被观察到，因为它们很容易被少量的水平共生体传播或偶尔的宿主转换所掩盖。基于细菌小亚基（16S）rDNA序列的当前共生体谱系，与基于蛤线粒体细胞色素氧化酶亚基I和大亚基（16S）rDNA序列的宿主谱系高度一致。这一系统发育证据支持了共物种形成假说以及这种共生关系中参与者之间的长期关联。
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本文引用的文献
1
MOLECULAR AND GEOLOGIC EVIDENCE OF SHARED HISTORY BETWEEN HERMIT CRABS AND THE SYMBIOTIC GENUS HYDRACTINIA.寄居蟹与共生水螅虫属之间共同历史的分子和地质证据
Evolution. 1991 Sep;45(6):1301-1316. doi: 10.1111/j.1558-5646.1991.tb02637.x.
2
Prokaryotic Cells in the Hydrothermal Vent Tube Worm Riftia pachyptila Jones: Possible Chemoautotrophic Symbionts.热液喷口管蠕虫 Riftia pachyptila Jones 中的原核细胞：可能的化能自养共生体。
Science. 1981 Jul 17;213(4505):340-2. doi: 10.1126/science.213.4505.340.
3
Hydrothermal Vent Clam and Tube Worm 13C/12C: Further Evidence of Nonphotosynthetic Food Sources.热液喷口蛤和管蠕虫的 13C/12C：非光合作用食物来源的进一步证据。
Science. 1981 Jul 17;213(4505):338-40. doi: 10.1126/science.213.4505.338.
4
Chemoautotrophic Potential of the Hydrothermal Vent Tube Worm, Riftia pachyptila Jones (Vestimentifera).热液喷口管蠕虫，Riftia pachyptila Jones（Vestimentifera）的化能自养潜能。
Science. 1981 Jul 17;213(4505):336-8. doi: 10.1126/science.213.4505.336.
5
Molecular phylogenetics of bacterial endosymbionts and their vestimentiferan hosts.细菌内共生体及其管蠕虫宿主的分子系统发育学
Mol Mar Biol Biotechnol. 1997 Sep;6(3):268-77.
6
Sulfur-oxidizing symbionts have not co-evolved with their hydrothermal vent tube worm hosts: an RFLP analysis.硫氧化共生体未与其热液喷口管蠕虫宿主共同进化：限制性片段长度多态性分析
Mol Mar Biol Biotechnol. 1997 Sep;6(3):180-8.
7
Phylogenetic diversity of bacterial symbionts of Solemya hosts based on comparative sequence analysis of 16S rRNA genes.基于16S rRNA基因比较序列分析的索莱米亚宿主细菌共生体的系统发育多样性
Appl Environ Microbiol. 1997 Jan;63(1):91-8. doi: 10.1128/aem.63.1.91-98.1997.
8
Intracellular endosymbiotic bacteria of Camponotus species (carpenter ants): systematics, evolution and ultrastructural characterization.弓背蚁属（木工蚁）的细胞内共生细菌：分类学、进化及超微结构特征
Mol Microbiol. 1996 Aug;21(3):479-89. doi: 10.1111/j.1365-2958.1996.tb02557.x.
9
Environmental transmission of a sulfur-oxidizing bacterial gill endosymbiont in the tropical lucinid bivalve Codakia orbicularis.热带双壳贝类圆球状科达克蛤中一种硫氧化细菌鳃内共生体的环境传播。
Appl Environ Microbiol. 1996 Jul;62(7):2324-30. doi: 10.1128/aem.62.7.2324-2330.1996.
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