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来自红蝽盘绒茧蜂的线粒体ND8基因未被全面编辑。

The mitochondrial ND8 gene from Crithidia oncopelti is not pan-edited.

作者信息

Aravin A A, Merzlyak E M, Kolesnikov A A

机构信息

Department of Molecular Biology, Biology Faculty, Moscow State University, Russia.

出版信息

FEBS Lett. 1998 Jul 24;431(3):457-60. doi: 10.1016/s0014-5793(98)00813-8.

Abstract

RNA editing in trypanosomatid mitochondria is a process involving the insertion and deletion of uridine residues within the coding region of maxicircle messenger RNA transcripts. Twelve of the 17 known genes need editing to produce functional molecules. We have analyzed the predicted editing sites for the Crithidia oncopelti mitochondrial NADH-ubiquinone oxidoreductase subunit 8 (ND8) gene based on known mRNAs from other trypanosomatid species. All studied ND8 mRNAs undergo editing throughout the coding (and 3' noncoding) sequences (pan-editing). The 5' part of the C. oncopelti ND8 gene undergoes editing (like in Leishmania tarentolae and Trypanosoma brucei) while the 3' part of the pre-edited gene corresponds to the 3' part of edited ND8 mRNAs from other organisms. The organization of the ND8 gene in C. oncopelti mitochondrial DNA differs from all organisms investigated so far -- this gene is not pan-edited. We have also localized the guide RNA for cytochrome b between 9S rRNA and the ND8 gene. This RNA shows high homology to the gCYb-II gene of L. tarentolae and the gCyb gene of Crithidia fasciculata. A hypothetical editing pattern for the cytochrome b gene in C. oncopelti maxicircles is proposed.

摘要

锥虫线粒体中的RNA编辑是一个在大环信使RNA转录本编码区内涉及尿苷残基插入和缺失的过程。已知的17个基因中有12个需要编辑才能产生功能分子。我们根据来自其他锥虫物种的已知mRNA,分析了克氏锥虫线粒体NADH-泛醌氧化还原酶亚基8(ND8)基因的预测编辑位点。所有研究的ND8 mRNA在整个编码(和3'非编码)序列中都经历编辑(全编辑)。克氏锥虫ND8基因的5'部分经历编辑(如在热带利什曼原虫和布氏锥虫中),而预编辑基因的3'部分对应于其他生物体中编辑后的ND8 mRNA的3'部分。克氏锥虫线粒体DNA中ND8基因的组织与迄今为止研究的所有生物体不同——该基因不是全编辑的。我们还将细胞色素b的引导RNA定位在9S rRNA和ND8基因之间。这种RNA与热带利什曼原虫的gCYb-II基因和克氏嗜菌体的gCyb基因具有高度同源性。提出了克氏锥虫大环中细胞色素b基因的一种假设编辑模式。

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