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悬浮微生物细胞的生长动力学:从单底物控制生长到混合底物动力学

Growth kinetics of suspended microbial cells: from single-substrate-controlled growth to mixed-substrate kinetics.

作者信息

Kovárová-Kovar K, Egli T

机构信息

Swiss Federal Institute for Environmental Science and Technology (EAWAG), CH-8600 Dübendorf, Switzerland.

出版信息

Microbiol Mol Biol Rev. 1998 Sep;62(3):646-66. doi: 10.1128/MMBR.62.3.646-666.1998.

DOI:10.1128/MMBR.62.3.646-666.1998
PMID:9729604
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC98929/
Abstract

Growth kinetics, i.e., the relationship between specific growth rate and the concentration of a substrate, is one of the basic tools in microbiology. However, despite more than half a century of research, many fundamental questions about the validity and application of growth kinetics as observed in the laboratory to environmental growth conditions are still unanswered. For pure cultures growing with single substrates, enormous inconsistencies exist in the growth kinetic data reported. The low quality of experimental data has so far hampered the comparison and validation of the different growth models proposed, and only recently have data collected from nutrient-controlled chemostat cultures allowed us to compare different kinetic models on a statistical basis. The problems are mainly due to (i) the analytical difficulty in measuring substrates at growth-controlling concentrations and (ii) the fact that during a kinetic experiment, particularly in batch systems, microorganisms alter their kinetic properties because of adaptation to the changing environment. For example, for Escherichia coli growing with glucose, a physiological long-term adaptation results in a change in KS for glucose from some 5 mg liter-1 to ca. 30 microg liter-1. The data suggest that a dilemma exists, namely, that either "intrinsic" KS (under substrate-controlled conditions in chemostat culture) or micromax (under substrate-excess conditions in batch culture) can be measured but both cannot be determined at the same time. The above-described conventional growth kinetics derived from single-substrate-controlled laboratory experiments have invariably been used for describing both growth and substrate utilization in ecosystems. However, in nature, microbial cells are exposed to a wide spectrum of potential substrates, many of which they utilize simultaneously (in particular carbon sources). The kinetic data available to date for growth of pure cultures in carbon-controlled continuous culture with defined mixtures of two or more carbon sources (including pollutants) clearly demonstrate that simultaneous utilization results in lowered residual steady-state concentrations of all substrates. This should result in a competitive advantage of a cell capable of mixed-substrate growth because it can grow much faster at low substrate concentrations than one would expect from single-substrate kinetics. Additionally, the relevance of the kinetic principles obtained from defined culture systems with single, mixed, or multicomponent substrates to the kinetics of pollutant degradation as it occurs in the presence of alternative carbon sources in complex environmental systems is discussed. The presented overview indicates that many of the environmentally relevant apects in growth kinetics are still waiting to be discovered, established, and exploited.

摘要

生长动力学,即比生长速率与底物浓度之间的关系,是微生物学中的基本工具之一。然而,尽管经过了半个多世纪的研究,但许多关于实验室中观察到的生长动力学在环境生长条件下的有效性和应用的基本问题仍然没有答案。对于以单一底物生长的纯培养物,所报道的生长动力学数据存在巨大的不一致性。到目前为止,实验数据的低质量阻碍了对所提出的不同生长模型的比较和验证,直到最近从营养物控制的恒化器培养物中收集的数据才使我们能够在统计基础上比较不同的动力学模型。这些问题主要是由于:(i)在生长控制浓度下测量底物存在分析困难;(ii)在动力学实验期间,特别是在分批系统中,微生物由于适应不断变化的环境而改变其动力学特性。例如,对于以葡萄糖生长的大肠杆菌,生理上的长期适应导致葡萄糖的KS值从约5毫克/升变为约30微克/升。数据表明存在一个困境,即要么可以测量“内在”的KS(在恒化器培养的底物控制条件下),要么可以测量最大比生长速率(在分批培养的底物过量条件下),但不能同时确定两者。上述源自单底物控制实验室实验的传统生长动力学一直被用于描述生态系统中的生长和底物利用。然而,在自然界中,微生物细胞会接触到各种各样的潜在底物,其中许多底物它们会同时利用(特别是碳源)。迄今为止,关于在碳控制的连续培养中使用两种或更多种碳源(包括污染物)的定义混合物对纯培养物生长的动力学数据清楚地表明,同时利用会导致所有底物的残留稳态浓度降低。这应该会使能够进行混合底物生长的细胞具有竞争优势,因为它在低底物浓度下的生长速度比单底物动力学预期的要快得多。此外,还讨论了从具有单一、混合或多组分底物的定义培养系统中获得的动力学原理与在复杂环境系统中存在替代碳源时污染物降解动力学的相关性。所呈现的概述表明,生长动力学中许多与环境相关的方面仍有待发现、确立和利用。