Zhu L, Prendergast F G, Kemple M D
Department of Physics, Indiana University Purdue University, Indianapolis 46202-3273, USA.
J Biomol NMR. 1998 Jul;12(1):135-44. doi: 10.1023/a:1008210613711.
Backbone and tryptophan side-chain mobilities in the 26-residue, cytolytic peptide melittin (MLT) were investigated by 15N and 13C NMR. Specifically, inverse-detected 15N T1 and steady-state NOE measurements were made at 30 and 51 MHz on MLT at 22 degrees C enriched with 15N at six amide positions and in the Trp19 side chain. Both the disordered MLT monomer (1.2 mM peptide at pH 3.6 in neat water) and alpha-helical MLT tetramer (4.0 mM peptide at pH 5.2 in 150 mM phosphate buffer) were examined. The relaxation data were analyzed in terms of the Lipari and Szabo model-free formalism with three parameters: tau m, the correlation time for the overall rotation; S2, a site-specific order parameter which is a measure of the amplitude of the internal motion; and tau e, a local, effective correlation time of the internal motion. A comparison was made of motional parameters from the 15N measurements and from 13C measurements on MLT, the latter having been made here and previously [Kemple et al. (1997) Biochemistry, 36, 1678-1688]. tau m and tau e values were consistent from data on the two nuclei. In the MLT monomer, S2 values for the backbone N-H and C alpha-H vectors in the same residue were similar in value but in the tetramer the N-H order parameters were about 0.2 units larger than the C alpha-H order parameters. The Trp side-chain N-H and C-H order parameters, and tau e values were generally similar in both the monomer and tetramer. Implications of these results regarding the dynamics of MLT are examined.
通过15N和13C核磁共振研究了26个残基的溶细胞肽蜂毒肽(MLT)的主链和色氨酸侧链的流动性。具体而言,在22℃下,对在六个酰胺位置和Trp19侧链富含15N的MLT,分别在30和51 MHz下进行了反向检测的15N T1和稳态NOE测量。研究了无序的MLT单体(在纯水中pH 3.6时为1.2 mM肽)和α-螺旋MLT四聚体(在150 mM磷酸盐缓冲液中pH 5.2时为4.0 mM肽)。根据Lipari和Szabo无模型形式体系,用三个参数分析弛豫数据:τm,整体旋转的相关时间;S2,一个位点特异性序参数,用于衡量内部运动的幅度;以及τe,内部运动的局部有效相关时间。对MLT的15N测量和13C测量得到的运动参数进行了比较,后者是在此处及之前进行的[Kemple等人(1997年),《生物化学》,36,1678 - 1688]。来自两个原子核的数据中,τm和τe值是一致的。在MLT单体中,同一残基中主链N - H和Cα - H向量的S2值在数值上相似,但在四聚体中,N - H序参数比Cα - H序参数大约大0.2个单位。色氨酸侧链的N - H和C - H序参数以及τe值在单体和四聚体中通常相似。研究了这些结果对MLT动力学的影响。