An S S, Carreño C, Marti D N, Schaller J, Albericio F, Llinas M
Department of Chemistry, Carnegie Mellon Univeristy, Pittsburgh, Pennsylvania 15213, USA.
Protein Sci. 1998 Sep;7(9):1960-9. doi: 10.1002/pro.5560070911.
Interactions between the kringle 4 (K4) domain of human plasminogen (Pgn) and segments of the N-terminal Glu1-Lys77 peptide (NTP) have been investigated via 1H-NMR at 500 MHz. NTP peptide stretches devoid of Lys residues but carrying an internal Arg residue show negligible affinity toward K4 (equilibrium association constant Ka < 0.05 mM(-1)). In contrast, while most fragments containing an internal Lys residue exhibit affinities comparable to that shown by the blocked Lys derivative Nalpha-acetyl-L-lysine-methyl ester (Ka approximately 0.2 mM(-1), peptides encompassing Lys50O consistently show higher Ka values. Among the investigated linear peptides, Nalpha-acetyl-Ala-Phe-Tyr-His-Ser-Ser-Lys5O-Glu-Gln-NH2 (AcAFYHSK5OEQ-NH2) exhibits the strongest interaction with K4 (Ka approximately 1.4 mM(-1)), followed by AcYHSK50EQ-NH2 (Ka approximately 0.9 mM(-1)). Relative to the wild-type sequence, mutated hexapeptides exhibit lesser affinity for K4. When a Lys50 --> Ser mutation was introduced (==> AcYHSS50EQ-NH2), binding was abolished. The Ile27-lle56 construct (L-NTP) contains the Lys50 site within a loop constrained by two cystine bridges. The propensity of recombinant Pgn K1 (rK1) and K2 (rK2) modules, and of Pgn fragments encompassing the intact K4 and K5 domains, for binding L-NTP, was investigated. We find that L-NTP interacts with rK1, rK2, K4, and K5-all lysine-binding kringles-in a fashion that closely mimics what has been observed for the Glul-HSer57 N-terminal fragment of Pgn (CB-NTP). Thus, both the constellation of kringle lysine binding site (LBS) aromatic residues that are perturbed upon complexation of L-NTP and magnitudes of kringle-L-NTP binding affinities (rK1, Ka approximately 4.3 mM(-1); rK2, Ka approximately 3.7 mM(-1; K4, Ka approximately 6.4 mM(1); and K5, Ka approximately 2.1 mM(-1)) are essentially the same as for the corresponding kringle-CB-NTP pairs. Molecular modeling studies suggest that the Glu39-Lys50 stretch in NTP generates an area that complements, both topologically and electrostatically, the solvent-exposed kringle LBS surface.
通过500兆赫的1H-NMR研究了人纤溶酶原(Pgn)的kringle 4(K4)结构域与N端Glu1-Lys77肽段(NTP)之间的相互作用。不含Lys残基但带有内部Arg残基的NTP肽段对K4的亲和力可忽略不计(平衡缔合常数Ka < 0.05 mM-1)。相比之下,虽然大多数含有内部Lys残基的片段表现出与封闭的Lys衍生物Nα-乙酰-L-赖氨酸甲酯相当的亲和力(Ka约为0.2 mM-1),但包含Lys50的肽段始终显示出更高的Ka值。在所研究的线性肽中,Nα-乙酰-Ala-Phe-Tyr-His-Ser-Ser-Lys50-Glu-Gln-NH2(AcAFYHSK50EQ-NH2)与K4的相互作用最强(Ka约为1.4 mM-1),其次是AcYHSK50EQ-NH2(Ka约为0.9 mM-1)。相对于野生型序列,突变的六肽对K4的亲和力较低。当引入Lys50→Ser突变(==> AcYHSS50EQ-NH2)时,结合被消除。Ile27-Ile56构建体(L-NTP)在由两个胱氨酸桥限制的环内包含Lys50位点。研究了重组Pgn K1(rK1)和K2(rK2)模块以及包含完整K4和K5结构域的Pgn片段与L-NTP结合的倾向。我们发现L-NTP与rK1、rK2、K4和K5(所有赖氨酸结合kringle)相互作用的方式与Pgn的Glu1-HSer57 N端片段(CB-NTP)所观察到的方式非常相似。因此,L-NTP络合时受到扰动的kringle赖氨酸结合位点(LBS)芳香族残基的组合以及kringle-L-NTP结合亲和力的大小(rK1,Ka约为4.3 mM-1;rK2,Ka约为3.7 mM-1;K4,Ka约为6.4 mM-1;K5,Ka约为2.1 mM-1)与相应的kringle-CB-NTP对基本相同。分子模拟研究表明,NTP中的Glu39-Lys50片段产生了一个在拓扑和静电方面都与溶剂暴露的kringle LBS表面互补的区域。