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七种毛圆线虫(线虫纲:毛圆科)核糖体DNA第一内转录间隔区的比较

A comparison of the first internal transcribed spacer of ribosomal DNA in seven species of Trichostrongylus (Nematoda: Trichostrongylidae).

作者信息

Hoste H, Chilton N B, Beveridge I, Gasser R B

机构信息

INRA-CR Tours, Station de Pathologie Aviaire et de Parasitologie, Nouzilly, France.

出版信息

Int J Parasitol. 1998 Aug;28(8):1251-60. doi: 10.1016/s0020-7519(98)00093-9.

Abstract

The first internal transcribed spacer (ITS-1) of the ribosomal DNA of seven species of Trichostrongylus was sequenced. The length of ITS-1 in the different species varied from 387 to 390 bases. The G + C content of the ITS-1 sequences were approximately 42%. Little or no intraspecific variation was detected in the three species. Trichostrongylus axei, Trichostrongylus colubriformis and Trichostrongylus vitrinus, for which multiple isolates from different geographical regions were sequenced. In contrast, the level of ITS-1 sequence differences between species ranged from 1.3% to 5.7%. The greatest sequence differences were detected between T. tenuis, the parasite species which infects birds and the six species found in mammals. Some of the nucleotide differences occurred at sites corresponding to recognition sites for restriction endonucleases. These results are compared with previous data obtained for the second internal transcribed spacer (ITS-2). The ITS-1 data indicate that this region of rDNA may also be useful for systematic studies in trichostrongylid nematodes.

摘要

对七种毛圆线虫核糖体DNA的第一个内部转录间隔区(ITS-1)进行了测序。不同物种的ITS-1长度在387至390个碱基之间变化。ITS-1序列的G + C含量约为42%。在三个物种中未检测到种内变异或变异极小。对来自不同地理区域的多个分离株的艾氏毛圆线虫、蛇形毛圆线虫和透明毛圆线虫进行了测序。相比之下,物种间ITS-1序列差异水平在1.3%至5.7%之间。在感染鸟类的寄生虫物种细颈毛圆线虫与在哺乳动物中发现的六个物种之间检测到最大的序列差异。一些核苷酸差异出现在与限制性内切酶识别位点相对应的位置。将这些结果与先前获得的第二个内部转录间隔区(ITS-2)的数据进行了比较。ITS-1数据表明,rDNA的这一区域也可能有助于毛圆线虫的系统研究。

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