Sharifdini Meysam, Heidari Zahra, Hesari Zahra, Vatandoost Sajad, Kia Eshrat Beigom
Department of Parasitology and Mycology, School of Medicine, Guilan University of Medical Sciences, Rasht, Iran.
Department of Medical Microbiology, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran.
Korean J Parasitol. 2017 Jun;55(3):279-285. doi: 10.3347/kjp.2017.55.3.279. Epub 2017 Jun 30.
The present study was performed to analyze molecularly the phylogenetic positions of human-infecting species in Mazandaran Province, Iran, which is an endemic area for trichostrongyliasis. DNA from 7 infected stool samples were extracted by using in-house (IH) method. PCR amplification of ITS2-rDNA region was performed, and products were sequenced. Phylogenetic analysis of the nucleotide sequence data was performed using MEGA 5.0 software. Six out of 7 isolates had high similarity with , while the other one showed high homology with registered in GenBank reference sequences. Intra-specific variations within isolates of and amounted to 0-1.8% and 0-0.6%, respectively. species obtained in the present study were in a cluster with the relevant reference sequences from previous studies. BLAST analysis indicated that there was 100% homology among all 6 ITS2 sequences of in the present study and most previously registered sequences of from human, sheep, and goat isolates from Iran and also human isolates from Laos, Thailand, and France. The ITS2 sequence of exhibited 99.4% homology with the human isolate of from Thailand, sheep isolates from New Zealand and Iran, and cattle isolate from USA.
本研究旨在对伊朗马赞德兰省(一种毛线虫病的流行地区)感染人类的物种进行系统发育位置的分子分析。采用内部(IH)方法从7份受感染粪便样本中提取DNA。进行ITS2-rDNA区域的PCR扩增,并对产物进行测序。使用MEGA 5.0软件对核苷酸序列数据进行系统发育分析。7个分离株中有6个与[具体物种1]具有高度相似性,而另一个与GenBank参考序列中登记的[具体物种2]具有高度同源性。[具体物种1]和[具体物种2]分离株内的种内变异分别为0 - 1.8%和0 - 0.6%。本研究中获得的[具体物种]与先前研究的相关参考序列聚为一类。BLAST分析表明,本研究中所有6个[具体物种1]的ITS2序列与先前登记的来自伊朗人类、绵羊和山羊分离株以及老挝、泰国和法国人类分离株的大多数[具体物种1]序列具有100%的同源性。[具体物种2]的ITS2序列与来自泰国的人类分离株[具体物种2]、来自新西兰和伊朗的绵羊分离株以及来自美国的牛分离株具有99.4%的同源性。