Agbandje-McKenna M, Llamas-Saiz A L, Wang F, Tattersall P, Rossmann M G
Department of Biological Sciences, Purdue University, West Lafayette IN 47907-1392, USA.
Structure. 1998 Nov 15;6(11):1369-81. doi: 10.1016/s0969-2126(98)00137-3.
Minute virus of mice (MVM) is a single-stranded (ss) DNA-containing, murine parvovirus with a capsid built up of 60 icosahedrally related polypeptide chains, each of which consists of the C-terminal region common to two structural proteins, VP1 and VP2. In infectious virions, most VP2 molecules are cleaved to VP3 by the removal of about 20 amino acids from the N terminus. Of the 587 amino acids in VP2, approximately half are identical to those in the analogous capsid protein of the antigenically distinct canine parvovirus (CPV), the crystal structure of which has previously been determined. The three-dimensional structure determination of MVMi (the immunosuppressive strain of MVM) was previously reported to 3.5 A resolution.
We report here an analysis of the MVMi virus structure and provide insights into tissue tropism, antigenicity and DNA packaging. Amino acids determining MVM tissue tropism were found to cluster on, or near, the viral surface. A conserved, glycine-rich, N-terminal peptide was seen to run through a cylindrical channel along each fivefold axis and may have implications for antigenicity. Density within the virion was interpreted as 29 ssDNA nucleotides per icosahedral asymmetric unit, and accounts for over one-third of the viral genome.
The presence of the glycine-rich sequence in the fivefold channels of MVMi provides a possible mechanism to explain how the unique N-terminal region of VP1 becomes externalized in infectious parvovirions. Residues that determine tropism may form an attachment recognition site for a secondary host-cell factor that modulates tissue specificity. The ordering of nucleotides in a similar region of the interior surface in the CPV and MVMi capsids suggests the existence of a genomic DNA-recognition site within the parvoviral capsid.
小鼠微小病毒(MVM)是一种含单链(ss)DNA的鼠细小病毒,其衣壳由60个二十面体相关的多肽链组成,每条多肽链由两种结构蛋白VP1和VP2共有的C末端区域组成。在感染性病毒粒子中,大多数VP2分子通过从N末端去除约20个氨基酸而被切割为VP3。VP2中的587个氨基酸中,约一半与抗原性不同的犬细小病毒(CPV)的类似衣壳蛋白中的氨基酸相同,CPV的晶体结构先前已确定。先前报道了MVMi(MVM的免疫抑制株)的三维结构测定,分辨率为3.5埃。
我们在此报告对MVMi病毒结构的分析,并深入探讨其组织嗜性、抗原性和DNA包装。发现决定MVM组织嗜性的氨基酸聚集在病毒表面或其附近。可见一个保守的、富含甘氨酸的N末端肽沿着每个五重轴穿过一个圆柱形通道,这可能与抗原性有关。病毒粒子内的密度被解释为每个二十面体不对称单位有29个单链DNA核苷酸,占病毒基因组的三分之一以上。
MVMi五重通道中富含甘氨酸序列的存在提供了一种可能的机制,来解释VP1独特的N末端区域在感染性细小病毒粒子中如何外化。决定嗜性的残基可能形成一个附着识别位点,用于调节组织特异性的二级宿主细胞因子。CPV和MVMi衣壳内表面类似区域中核苷酸的排序表明,细小病毒衣壳内存在基因组DNA识别位点。