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一种昆虫细小病毒(大蜡螟浓病毒)在3.7埃分辨率下的结构。

The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution.

作者信息

Simpson A A, Chipman P R, Baker T S, Tijssen P, Rossmann M G

机构信息

Department of Biological Sciences, Purdue University, West Lafayette, IN 47907-1392, USA.

出版信息

Structure. 1998 Nov 15;6(11):1355-67. doi: 10.1016/s0969-2126(98)00136-1.

Abstract

BACKGROUND

Parvoviruses infect vertebrates, insects and crustaceans. Many arthropod parvoviruses (densoviruses) are highly pathogenic and kill approximately 90% of the host larvae within days, making them potentially effective as selective pesticides. Improved understanding of densoviral structure and function is therefore desirable. There are four different initiation sites for translation of the densovirus capsid protein mRNA, giving rise to the viral proteins VP1 to VP4. Sixty copies of the common, C-terminal domain make up the ordered part of the icosahedral capsid.

RESULTS

The Galleria mellonella densovirus (GMDNV) capsid protein consists of a core beta-barrel motif, similar to that found in many other viral capsid proteins. The structure most closely resembles that of the vertebrate parvoviruses, but it has diverged beyond recognition in many of the long loop regions that constitute the surface features and intersubunit contacts. The N termini of twofold-related subunits have swapped their positions relative to those of the vertebrate parvoviruses. Unlike in the vertebrate parvoviruses, in GmDNV there is no continuous electron density in the channels running along the fivefold axes of the virus. Electron density corresponding to some of the single-stranded DNA genome is visible in the crystal structure, but it is not as well defined as in the vertebrate parvoviruses.

CONCLUSIONS

The sequence of the glycine-rich motif, which occupies each of the channels along the fivefold axes in vertebrate viruses, is conserved between mammalian and insect parvoviruses. This motif may serve to externalize the N-terminal region of the single VP1 subunit per particle. The domain swapping of the N termini between insect and vertebrate parvoviruses may have the effect of increasing capsid stability in GmDNV.

摘要

背景

细小病毒可感染脊椎动物、昆虫和甲壳类动物。许多节肢动物细小病毒(浓核病毒)具有高度致病性,可在数天内杀死约90%的宿主幼虫,使其有可能成为有效的选择性杀虫剂。因此,需要更好地了解浓核病毒的结构和功能。浓核病毒衣壳蛋白mRNA有四个不同的翻译起始位点,可产生病毒蛋白VP1至VP4。二十面体衣壳的有序部分由60个相同的C末端结构域组成。

结果

蜡螟浓核病毒(GMDNV)衣壳蛋白由一个核心β桶基序组成,类似于许多其他病毒衣壳蛋白中发现的基序。其结构与脊椎动物细小病毒的结构最为相似,但在构成表面特征和亚基间接触的许多长环区域已发生了分化,难以识别。与脊椎动物细小病毒相比,二重相关亚基的N末端已交换了位置。与脊椎动物细小病毒不同,在GmDNV中,沿病毒五重轴的通道中没有连续的电子密度。在晶体结构中可见对应于一些单链DNA基因组的电子密度,但不如脊椎动物细小病毒中的那样明确。

结论

在脊椎动物病毒中,沿五重轴占据每个通道的富含甘氨酸基序的序列在哺乳动物和昆虫细小病毒之间是保守的。该基序可能有助于使每个病毒粒子中单个VP1亚基的N末端区域外化。昆虫和脊椎动物细小病毒之间N末端的结构域交换可能具有增加GmDNV衣壳稳定性的作用。

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