• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

影响大肠杆菌UmuD'蛋白参与SOS诱变能力的突变。

Mutations affecting the ability of the Escherichia coli UmuD' protein to participate in SOS mutagenesis.

作者信息

Ohta T, Sutton M D, Guzzo A, Cole S, Ferentz A E, Walker G C

机构信息

Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

出版信息

J Bacteriol. 1999 Jan;181(1):177-85. doi: 10.1128/JB.181.1.177-185.1999.

DOI:10.1128/JB.181.1.177-185.1999
PMID:9864328
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC103547/
Abstract

The products of the SOS-regulated umuDC operon are required for most UV and chemical mutagenesis in Escherichia coli, a process that results from a translesion synthesis mechanism. The UmuD protein is activated for its role in mutagenesis by a RecA-facilitated autodigestion that removes the N-terminal 24 amino acids. A previous genetic screen for nonmutable umuD mutants had resulted in the isolation of a set of missense mutants that produced UmuD proteins that were deficient in RecA-mediated cleavage (J. R. Battista, T. Ohta, T. Nohmi, W. Sun, and G. C. Walker, Proc. Natl. Acad. Sci. USA 87:7190-7194, 1990). To identify elements of the UmuD' protein necessary for its role in translesion synthesis, we began with umuD', a modified form of the umuD gene that directly encodes the UmuD' protein, and obtained missense umuD' mutants deficient in UV and methyl methanesulfonate mutagenesis. The D39G, L40R, and T51I mutations affect residues located at the UmuD'2 homodimer interface and interfere with homodimer formation in vivo. The D75A mutation affects a highly conserved residue located at one end of the central strand in a three-stranded beta-sheet and appears to interfere with UmuD'2 homodimer formation indirectly by affecting the structure of the UmuD' monomer. When expressed from a multicopy plasmid, the L40R umuD' mutant gene exhibited a dominant negative effect on a chromosomal umuD+ gene with respect to UV mutagenesis, suggesting that the mutation has an effect on UmuD' function that goes beyond its impairment of homodimer formation. The G129D mutation affects a highly conserved residue that lies at the end of the long C-terminal beta-strand and results in a mutant UmuD' protein that exhibits a strongly dominant negative effect on UV mutagenesis in a umuD+ strain. The A30V and E35K mutations alter residues in the N-terminal arms of the UmuD'2 homodimer, which are mobile in solution.

摘要

SOS 调控的 umuDC 操纵子产物是大肠杆菌中大多数紫外线和化学诱变所必需的,这一过程由跨损伤合成机制导致。UmuD 蛋白通过 RecA 促进的自切割作用被激活以发挥其诱变作用,该自切割作用去除了 N 端的 24 个氨基酸。先前针对不可诱变的 umuD 突变体进行的遗传筛选分离出了一组错义突变体,这些突变体产生的 UmuD 蛋白在 RecA 介导的切割方面存在缺陷(J. R. 巴蒂斯塔、T. 太田、T. 野见、W. 孙和 G. C. 沃克,《美国国家科学院院刊》87:7190 - 7194, 1990)。为了鉴定 UmuD' 蛋白在跨损伤合成中发挥作用所必需的元件,我们从 umuD' 开始,umuD' 是 umuD 基因的一种修饰形式,直接编码 UmuD' 蛋白,并获得了在紫外线和甲磺酸甲酯诱变方面存在缺陷的错义 umuD' 突变体。D39G、L40R 和 T51I 突变影响位于 UmuD'2 同型二聚体界面的残基,并在体内干扰同型二聚体的形成。D75A 突变影响位于三链β折叠中央链一端的一个高度保守残基,似乎通过影响 UmuD' 单体的结构间接干扰 UmuD'2 同型二聚体的形成。当从多拷贝质粒表达时,L40R umuD' 突变基因在紫外线诱变方面对染色体上的 umuD + 基因表现出显性负效应,这表明该突变对 UmuD' 功能的影响超出了其对同型二聚体形成的损害。G129D 突变影响位于长 C 端β链末端的一个高度保守残基,并导致突变的 UmuD' 蛋白在 umuD + 菌株中对紫外线诱变表现出强烈的显性负效应。A30V 和 E35K 突变改变了 UmuD'2 同型二聚体 N 端臂中的残基,这些残基在溶液中是可移动的。

相似文献

1
Mutations affecting the ability of the Escherichia coli UmuD' protein to participate in SOS mutagenesis.影响大肠杆菌UmuD'蛋白参与SOS诱变能力的突变。
J Bacteriol. 1999 Jan;181(1):177-85. doi: 10.1128/JB.181.1.177-185.1999.
2
The bacteriophage P1 HumD protein is a functional homolog of the prokaryotic UmuD'-like proteins and facilitates SOS mutagenesis in Escherichia coli.噬菌体P1 HumD蛋白是原核生物类UmuD'蛋白的功能同源物,可促进大肠杆菌中的SOS诱变。
J Bacteriol. 1999 Nov;181(22):7005-13. doi: 10.1128/JB.181.22.7005-7013.1999.
3
Novel Escherichia coli umuD' mutants: structure-function insights into SOS mutagenesis.新型大肠杆菌umuD'突变体:SOS诱变的结构-功能见解
J Bacteriol. 1998 Sep;180(17):4658-66. doi: 10.1128/JB.180.17.4658-4666.1998.
4
Dominant negative umuD mutations decreasing RecA-mediated cleavage suggest roles for intact UmuD in modulation of SOS mutagenesis.显性负性umuD突变减少RecA介导的切割,这表明完整的UmuD在SOS诱变调节中发挥作用。
Proc Natl Acad Sci U S A. 1990 Sep;87(18):7190-4. doi: 10.1073/pnas.87.18.7190.
5
The genetic requirements for UmuDC-mediated cold sensitivity are distinct from those for SOS mutagenesis.UmuDC介导的冷敏感性的遗传要求与SOS诱变的遗传要求不同。
J Bacteriol. 1996 Aug;178(15):4400-11. doi: 10.1128/jb.178.15.4400-4411.1996.
6
Substitution of UmuD' for UmuD does not affect SOS mutagenesis.用UmuD'替代UmuD不影响SOS诱变。
Biochimie. 1991 Apr;73(4):471-8. doi: 10.1016/0300-9084(91)90114-g.
7
The UmuD' protein filament and its potential role in damage induced mutagenesis.UmuD' 蛋白丝及其在损伤诱导突变中的潜在作用。
Structure. 1996 Dec 15;4(12):1401-12. doi: 10.1016/s0969-2126(96)00148-7.
8
Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).将一种DNA损伤检查点效应因子(UmuD2C)转化为一种损伤旁路聚合酶(UmuD'2C)。
EMBO J. 2001 Aug 1;20(15):4287-98. doi: 10.1093/emboj/20.15.4287.
9
Analysis of the region between amino acids 30 and 42 of intact UmuD by a monocysteine approach.采用单半胱氨酸方法对完整的UmuD中氨基酸30至42之间的区域进行分析。
J Bacteriol. 1996 Dec;178(24):7295-303. doi: 10.1128/jb.178.24.7295-7303.1996.
10
A model for a umuDC-dependent prokaryotic DNA damage checkpoint.一种依赖umuDC的原核生物DNA损伤检查点模型。
Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9218-23. doi: 10.1073/pnas.96.16.9218.

引用本文的文献

1
Validation of Lon Gene Disruption using Linear DNA Cassette by Crelox Mechanism in  Strains: To Achieve Better Solubility of Putrescine Monooxygenase.通过Crelox机制使用线性DNA盒在菌株中验证Lon基因破坏:以实现腐胺单加氧酶更好的溶解性。
Indian J Microbiol. 2023 Mar;63(1):56-64. doi: 10.1007/s12088-023-01056-x. Epub 2023 Feb 2.
2
Translesion DNA Synthesis.跨损伤DNA合成
EcoSal Plus. 2012 Nov;5(1). doi: 10.1128/ecosalplus.7.2.2.
3
Escherichia coli radD (yejH) gene: a novel function involved in radiation resistance and double-strand break repair.大肠杆菌radD(yejH)基因:一种与辐射抗性和双链断裂修复有关的新功能。
Mol Microbiol. 2015 Mar;95(5):754-68. doi: 10.1111/mmi.12885. Epub 2015 Jan 16.
4
Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation.参与极端电离辐射暴露下存活的大肠杆菌基因及通路。
J Bacteriol. 2014 Oct;196(20):3534-45. doi: 10.1128/JB.01589-14. Epub 2014 Jul 21.
5
The dimeric SOS mutagenesis protein UmuD is active as a monomer.二聚体 SOS 诱变蛋白 UmuD 以单体形式发挥活性。
J Biol Chem. 2011 Feb 4;286(5):3607-17. doi: 10.1074/jbc.M110.167254. Epub 2010 Nov 29.
6
Characterization of novel alleles of the Escherichia coli umuDC genes identifies additional interaction sites of UmuC with the beta clamp.大肠杆菌umuDC基因新等位基因的表征确定了UmuC与β夹子的其他相互作用位点。
J Bacteriol. 2009 Oct;191(19):5910-20. doi: 10.1128/JB.00292-09. Epub 2009 Jul 24.
7
Sliding clamp-DNA interactions are required for viability and contribute to DNA polymerase management in Escherichia coli.滑动夹与DNA的相互作用是大肠杆菌生存所必需的,并有助于DNA聚合酶的管理。
J Mol Biol. 2009 Mar 20;387(1):74-91. doi: 10.1016/j.jmb.2009.01.050. Epub 2009 Jan 30.
8
Isolation of SOS constitutive mutants of Escherichia coli.大肠杆菌SOS组成型突变体的分离
J Bacteriol. 2004 Nov;186(21):7149-60. doi: 10.1128/JB.186.21.7149-7160.2004.
9
Posttranslational modification of the umuD-encoded subunit of Escherichia coli DNA polymerase V regulates its interactions with the beta processivity clamp.大肠杆菌DNA聚合酶V的umuD编码亚基的翻译后修饰调节其与β持续性钳的相互作用。
Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5307-12. doi: 10.1073/pnas.082322099.
10
Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C).将一种DNA损伤检查点效应因子(UmuD2C)转化为一种损伤旁路聚合酶(UmuD'2C)。
EMBO J. 2001 Aug 1;20(15):4287-98. doi: 10.1093/emboj/20.15.4287.

本文引用的文献

1
The mutagenesis proteins UmuD' and UmuC prevent lethal frameshifts while increasing base substitution mutations.诱变蛋白UmuD'和UmuC可防止致死性移码,同时增加碱基置换突变。
Mol Cell. 1998 Aug;2(2):191-9. doi: 10.1016/s1097-2765(00)80129-x.
2
Skiing the black diamond slope: progress on the biochemistry of translesion DNA synthesis.挑战高难度滑雪道:跨损伤DNA合成的生物化学进展
Proc Natl Acad Sci U S A. 1998 Sep 1;95(18):10348-50. doi: 10.1073/pnas.95.18.10348.
3
Novel Escherichia coli umuD' mutants: structure-function insights into SOS mutagenesis.新型大肠杆菌umuD'突变体:SOS诱变的结构-功能见解
J Bacteriol. 1998 Sep;180(17):4658-66. doi: 10.1128/JB.180.17.4658-4666.1998.
4
Biochemical basis of SOS-induced mutagenesis in Escherichia coli: reconstitution of in vitro lesion bypass dependent on the UmuD'2C mutagenic complex and RecA protein.大肠杆菌中SOS诱导突变的生化基础:依赖UmuD'2C诱变复合物和RecA蛋白的体外损伤旁路重建。
Proc Natl Acad Sci U S A. 1998 Aug 18;95(17):9755-60. doi: 10.1073/pnas.95.17.9755.
5
Mutagenesis and more: umuDC and the Escherichia coli SOS response.诱变作用及其他:umuDC与大肠杆菌SOS反应
Genetics. 1998 Apr;148(4):1599-610. doi: 10.1093/genetics/148.4.1599.
6
Dimerization of the UmuD' protein in solution and its implications for regulation of SOS mutagenesis.溶液中UmuD'蛋白的二聚化及其对SOS诱变调控的影响。
Nat Struct Biol. 1997 Dec;4(12):979-83. doi: 10.1038/nsb1297-979.
7
Quantitation of the inhibition of Hfr x F- recombination by the mutagenesis complex UmuD'C.诱变复合物UmuD'C对Hfr×F-重组抑制作用的定量分析。
J Mol Biol. 1997 Jul 11;270(2):201-11. doi: 10.1006/jmbi.1997.1098.
8
The UmuD' protein filament and its potential role in damage induced mutagenesis.UmuD' 蛋白丝及其在损伤诱导突变中的潜在作用。
Structure. 1996 Dec 15;4(12):1401-12. doi: 10.1016/s0969-2126(96)00148-7.
9
Analysis of the region between amino acids 30 and 42 of intact UmuD by a monocysteine approach.采用单半胱氨酸方法对完整的UmuD中氨基酸30至42之间的区域进行分析。
J Bacteriol. 1996 Dec;178(24):7295-303. doi: 10.1128/jb.178.24.7295-7303.1996.
10
Regulation of SOS mutagenesis by proteolysis.通过蛋白水解作用对SOS诱变的调控。
Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10291-6. doi: 10.1073/pnas.93.19.10291.