• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质中芳香族氨基酸的核磁共振谱归属:两个Ets结构域的分析

Assigning the NMR spectra of aromatic amino acids in proteins: analysis of two Ets pointed domains.

作者信息

Slupsky C M, Gentile L N, McIntosh L P

机构信息

Department of Biochemistry and Molecular Biology, and Protein Engineering Network of Centres of Excellence, University of British Columbia, Vancouver, Canada.

出版信息

Biochem Cell Biol. 1998;76(2-3):379-90. doi: 10.1139/bcb-76-2-3-379.

DOI:10.1139/bcb-76-2-3-379
PMID:9923707
Abstract

The measurement of interproton nuclear Overhauser enhancements (NOEs) and dihedral angle restraints of aromatic amino acids is a critical step towards determining the structure of a protein. The complete assignment of the resonances from aromatic rings and the subsequent resolution and identification of their associated NOEs, however, can be a difficult task. Shown here is a strategy for assigning the 1H, 13C, and 15N signals from the aromatic side chains of histidine, tryptophan, tyrosine, and phenylalanine using a suite of homo- and hetero-nuclear scalar and NOE correlation experiments, as well as selective deuterium isotope labelling. In addition, a comparison of NOE information obtained from homonuclear NOE spectroscopy (NOESY) and 13C-edited NOESY-heteronuclear single quantum correlation experiments indicates that high-resolution homonuclear two-dimensional NOESY spectra of selectively deuterated proteins are invaluable for obtaining distance restraints to the aromatic residues.

摘要

测量质子间的核Overhauser增强效应(NOE)以及芳香族氨基酸的二面角限制是确定蛋白质结构的关键步骤。然而,对芳香环共振进行完整归属以及随后解析和识别其相关的NOE可能是一项艰巨的任务。本文展示了一种策略,即使用一系列同核和异核标量及NOE相关实验,以及选择性氘同位素标记,来归属组氨酸、色氨酸、酪氨酸和苯丙氨酸芳香侧链的1H、13C和15N信号。此外,对同核NOE光谱(NOESY)和13C编辑的NOESY - 异核单量子相关实验获得的NOE信息进行比较表明,选择性氘代蛋白质的高分辨率同核二维NOESY光谱对于获取与芳香族残基的距离限制非常宝贵。

相似文献

1
Assigning the NMR spectra of aromatic amino acids in proteins: analysis of two Ets pointed domains.蛋白质中芳香族氨基酸的核磁共振谱归属:两个Ets结构域的分析
Biochem Cell Biol. 1998;76(2-3):379-90. doi: 10.1139/bcb-76-2-3-379.
2
Triple-resonance methods for complete resonance assignment of aromatic protons and directly bound heteronuclei in histidine and tryptophan residues.用于组氨酸和色氨酸残基中芳香族质子及直接相连杂核的完全共振归属的三共振方法。
J Biomol NMR. 2005 Aug;32(4):309-28. doi: 10.1007/s10858-005-1195-4.
3
Two-dimensional NMR studies of staphylococcal nuclease: evidence for conformational heterogeneity from hydrogen-1, carbon-13, and nitrogen-15 spin system assignments of the aromatic amino acids in the nuclease H124L-thymidine 3',5'-bisphosphate-Ca2+ ternary complex.葡萄球菌核酸酶的二维核磁共振研究:来自核酸酶H124L-胸腺嘧啶3',5'-二磷酸-Ca2+三元复合物中芳香族氨基酸的氢-1、碳-13和氮-15自旋系统归属的构象异质性证据。
Biochemistry. 1990 May 1;29(17):4242-53. doi: 10.1021/bi00469a029.
4
Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach.蛋白质三维结构测定以及13C和15N分离的核Overhauser效应(NOE)数据的序列特异性归属。一种新颖的实空间从头算方法。
J Mol Biol. 1994 Nov 4;243(4):696-718. doi: 10.1016/0022-2836(94)90042-6.
5
An efficient procedure for assignment of the proton, carbon and nitrogen resonances in 13C/15N labeled nucleic acids.一种用于确定¹³C/¹⁵N标记核酸中质子、碳和氮共振峰归属的有效方法。
J Mol Biol. 1993 Aug 20;232(4):1141-56. doi: 10.1006/jmbi.1993.1466.
6
Four-dimensional heteronuclear triple-resonance NMR spectroscopy of interleukin-1 beta in solution.溶液中白细胞介素-1β的四维异核三共振核磁共振光谱学
Science. 1990 Jul 27;249(4967):411-4. doi: 10.1126/science.2377896.
7
Assignment of the side-chain 1H and 13C resonances of interleukin-1 beta using double- and triple-resonance heteronuclear three-dimensional NMR spectroscopy.利用双共振和三共振异核三维核磁共振波谱法对白细胞介素-1β的侧链1H和13C共振进行归属
Biochemistry. 1990 Sep 4;29(35):8172-84. doi: 10.1021/bi00487a027.
8
Detection of intermolecular NOE interactions in large protein complexes.大型蛋白质复合物中分子间核Overhauser效应相互作用的检测
Prog Nucl Magn Reson Spectrosc. 2016 Nov;97:40-56. doi: 10.1016/j.pnmrs.2016.08.002. Epub 2016 Aug 18.
9
3D H(aro)-NOESY-CH3NH and C(aro)-NOESY-CH3NH experiments for double labeled proteins.用于双标记蛋白质的3D H(aro)-NOESY-CH3NH和C(aro)-NOESY-CH3NH实验。
J Biomol NMR. 2001 Apr;19(4):355-60. doi: 10.1023/a:1011288324900.
10
Solution structure of the DNA-binding domain of the heat shock transcription factor determined by multidimensional heteronuclear magnetic resonance spectroscopy.通过多维异核磁共振光谱法测定的热休克转录因子DNA结合结构域的溶液结构
Protein Sci. 1994 Oct;3(10):1806-21. doi: 10.1002/pro.5560031020.

引用本文的文献

1
A DNA mimic: the structure and mechanism of action for the anti-repressor protein AbbA.一种 DNA 模拟物:抗阻遏蛋白 AbbA 的结构和作用机制。
J Mol Biol. 2014 May 1;426(9):1911-24. doi: 10.1016/j.jmb.2014.02.010. Epub 2014 Feb 15.
2
α-Ketoacids as precursors for phenylalanine and tyrosine labelling in cell-based protein overexpression.α-酮酸作为细胞内蛋白质过表达中苯丙氨酸和酪氨酸标记的前体。
J Biomol NMR. 2013 Dec;57(4):327-31. doi: 10.1007/s10858-013-9796-9. Epub 2013 Nov 22.
3
Unusual biophysics of immune signaling-related intrinsically disordered proteins.
免疫信号相关内在无序蛋白的异常生物物理学
Self Nonself. 2010 Oct;1(4):271-281. doi: 10.4161/self.1.4.13641.
4
Identification and structural characterization of a CBP/p300-binding domain from the ETS family transcription factor GABP alpha.从ETS家族转录因子GABPα中鉴定并进行CBP/p300结合结构域的结构表征。
J Mol Biol. 2008 Mar 28;377(3):636-46. doi: 10.1016/j.jmb.2008.01.054. Epub 2008 Jan 30.
5
Heterologous expression of hen egg white lysozyme and resonance assignment of tryptophan side chains in its non-native states.鸡蛋清溶菌酶的异源表达及其非天然状态下色氨酸侧链的共振归属
J Biomol NMR. 2005 Oct;33(2):95-104. doi: 10.1007/s10858-005-2063-y.
6
Chemical shift and secondary structure conservation of the PNT/SAM domains from the ets family of transcription factors.ETS 转录因子家族中 PNT/SAM 结构域的化学位移和二级结构保守性。
J Biomol NMR. 2002 Sep;24(1):71-2. doi: 10.1023/a:1020617426325.
7
Structure of the Ets-1 pointed domain and mitogen-activated protein kinase phosphorylation site.Ets-1 尖状结构域及丝裂原活化蛋白激酶磷酸化位点的结构
Proc Natl Acad Sci U S A. 1998 Oct 13;95(21):12129-34. doi: 10.1073/pnas.95.21.12129.