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纤细裸藻叶绿体DNA转录区域的图谱绘制。

Mapping of transcribed regions of Euglena gracilis chloroplast DNA.

作者信息

Chelm B K, Gray P W, Hallick R B

出版信息

Biochemistry. 1978 Oct 3;17(20):4239-44. doi: 10.1021/bi00613a020.

DOI:10.1021/bi00613a020
PMID:101238
Abstract

RNA transcription from defined regions of the Euglena gracilis chloroplast genome has been characterized by hybridization of total cell RNA to 3H-labeled chloroplast DNA restriction endonuclease fragments. Chloroplast DNA was digested into five fragments of 53, 35, 25, 10, and 6.9 kilobase pairs (kbp) with Pst1. The 53-kbp DNA was also subfractionated by BamHI digestion. The extent of transcription of the Pst1 fragments was found to be 30, 17, 15, 2.2, and 2.3 kb of RNA, respectively. The total amount of RNA transcription of 67 kb represents 26% to the double-strand information content of the genome. Transcribed regions are dispersed throughout the DNA. The RNA transcripts are present in two major abundance classes in the cell. High abundance transcripts of approximately 10(6) copies/cell were mapped in the rRNA gene region of the 53-kbp fragment and in the 35-kbp fragment. Low abundance transcripts of approximately 1000--4000 copies/cell were mapped in all five Pst fragments.

摘要

通过将总细胞RNA与3H标记的叶绿体DNA限制性内切酶片段杂交,对纤细裸藻叶绿体基因组特定区域的RNA转录进行了表征。用Pst1将叶绿体DNA消化成5个片段,大小分别为53、35、25、10和6.9千碱基对(kbp)。53-kbp的DNA也通过BamHI消化进行了进一步细分。发现Pst1片段的转录程度分别为30、17、15、2.2和2.3 kb的RNA。67 kb的RNA转录总量占基因组双链信息含量的26%。转录区域分散在整个DNA中。RNA转录本在细胞中存在于两个主要丰度类别中。大约10(6)拷贝/细胞的高丰度转录本定位在53-kbp片段的rRNA基因区域和35-kbp片段中。大约1000 - 4000拷贝/细胞的低丰度转录本定位在所有五个Pst片段中。

相似文献

1
Mapping of transcribed regions of Euglena gracilis chloroplast DNA.纤细裸藻叶绿体DNA转录区域的图谱绘制。
Biochemistry. 1978 Oct 3;17(20):4239-44. doi: 10.1021/bi00613a020.
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Isolation of Euglena gracilis chloroplast 5S ribosomal RNA and mapping the 5S rRNA gene on chloroplast DNA.纤细裸藻叶绿体5S核糖体RNA的分离及5S rRNA基因在叶绿体DNA上的定位
Biochemistry. 1979 May 1;18(9):1820-5. doi: 10.1021/bi00576a029.
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Euglena gracilis chloroplast ribosomal RNA transcription units. I. The location of transfer RNA, 5 S, 16 S, and 23 S ribosomal RNA genes.纤细裸藻叶绿体核糖体RNA转录单位。I. 转运RNA、5S、16S和23S核糖体RNA基因的定位。
J Biol Chem. 1980 Nov 25;255(22):10991-6.
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Expression of the chloroplast ribosomal RNA genes of Euglena gracilis during chloroplast development.纤细裸藻叶绿体发育过程中叶绿体核糖体RNA基因的表达
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Cellular content of chloroplast DNA and chloroplast ribosomal RNA genes in Euglena gracilis during chloroplast development.纤细裸藻叶绿体发育过程中叶绿体DNA和叶绿体核糖体RNA基因的细胞内容物
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Detection of multiple, unspliced precursor mRNA transcripts for the Mr 32,000 thylakoid membrane protein from Euglena gracilis chloroplasts.检测来自纤细裸藻叶绿体的32,000分子量类囊体膜蛋白的多个未剪接前体mRNA转录本。
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Complexity and abundance of ribonucleic acid transcribed from restriction endonuclease fragments of Euglena chloroplast deoxyribonucleic acid during chloroplast development.叶绿体发育过程中从眼虫叶绿体脱氧核糖核酸限制性内切酶片段转录而来的核糖核酸的复杂性和丰度。
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Changes in the expression of the chloroplast genome of Euglena gracilis during chloroplast development.纤细裸藻叶绿体发育过程中叶绿体基因组表达的变化。
Biochemistry. 1976 Feb 10;15(3):593-9. doi: 10.1021/bi00648a022.
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The Euglena gracilis chloroplast genome: analysis by restriction enzymes.纤细裸藻叶绿体基因组:用限制酶进行分析
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Restriction endonuclease map of Euglena gracilis chloroplast DNA.纤细裸藻叶绿体DNA的限制性内切酶图谱。
Biochemistry. 1977 Apr 19;16(8):1665-71. doi: 10.1021/bi00627a022.

引用本文的文献

1
In vivo transcriptional products of the chloroplast DNA of Euglena gracilis.衣藻叶绿体 DNA 的活体转录产物。
Curr Genet. 1983 Jul;7(4):265-72. doi: 10.1007/BF00376071.
2
Transcriptome analysis of the Euglena gracilis plastid chromosome.纤细裸藻质体染色体的转录组分析。
Curr Genet. 2009 Aug;55(4):425-38. doi: 10.1007/s00294-009-0256-8. Epub 2009 Jun 2.
3
Transcription program of the chloroplast genome of Euglena gracilis during chloroplast development.纤细裸藻叶绿体基因组在叶绿体发育过程中的转录程序。
Proc Natl Acad Sci U S A. 1979 May;76(5):2258-62. doi: 10.1073/pnas.76.5.2258.