Suppr超能文献

根瘤菌温和噬菌体16-3位点特异性重组基因int和xis的鉴定

Identification of site-specific recombination genes int and xis of the Rhizobium temperate phage 16-3.

作者信息

Semsey S, Papp I, Buzas Z, Patthy A, Orosz L, Papp P P

机构信息

Institute for Molecular Genetics, Agricultural Biotechnology Center, Gödöllo, H-2100 Hungary.

出版信息

J Bacteriol. 1999 Jul;181(14):4185-92. doi: 10.1128/JB.181.14.4185-4192.1999.

Abstract

Phage 16-3 is a temperate phage of Rhizobium meliloti 41 which integrates its genome with high efficiency into the host chromosome by site-specific recombination through DNA sequences of attB and attP. Here we report the identification of two phage-encoded genes required for recombinations at these sites: int (phage integration) and xis (prophage excision). We concluded that Int protein of phage 16-3 belongs to the integrase family of tyrosine recombinases. Despite similarities to the cognate systems of the lambdoid phages, the 16-3 int xis att system is not active in Escherichia coli, probably due to requirements for host factors that differ in Rhizobium meliloti and E. coli. The application of the 16-3 site-specific recombination system in biotechnology is discussed.

摘要

噬菌体16 - 3是苜蓿根瘤菌41的一种温和噬菌体,它通过attB和attP的DNA序列,通过位点特异性重组将其基因组高效整合到宿主染色体中。在此我们报告了在这些位点进行重组所需的两个噬菌体编码基因的鉴定:int(噬菌体整合)和xis(原噬菌体切除)。我们得出结论,噬菌体16 - 3的Int蛋白属于酪氨酸重组酶的整合酶家族。尽管与λ样噬菌体的同源系统有相似之处,但16 - 3 int xis att系统在大肠杆菌中不活跃,这可能是由于苜蓿根瘤菌和大肠杆菌对宿主因子的需求不同。本文还讨论了16 - 3位点特异性重组系统在生物技术中的应用。

相似文献

1
Identification of site-specific recombination genes int and xis of the Rhizobium temperate phage 16-3.
J Bacteriol. 1999 Jul;181(14):4185-92. doi: 10.1128/JB.181.14.4185-4192.1999.
3
Genome Integration and Excision by a New Streptomyces Bacteriophage, ϕJoe.
Appl Environ Microbiol. 2017 Feb 15;83(5). doi: 10.1128/AEM.02767-16. Print 2017 Mar 1.
8
Site-specific recombination of temperate Myxococcus xanthus phage Mx8: genetic elements required for integration.
J Bacteriol. 1999 Jul;181(13):4050-61. doi: 10.1128/JB.181.13.4050-4061.1999.
10
Sequence analysis and comparison of int and xis genes from staphylococcal bacteriophages L54a and phi 11.
J Bacteriol. 1990 May;172(5):2568-75. doi: 10.1128/jb.172.5.2568-2575.1990.

引用本文的文献

1
Dark Matter Carried by phiLM21-like Prophages.
Int J Mol Sci. 2025 Sep 6;26(17):8704. doi: 10.3390/ijms26178704.
2
New evidence supports the prophage origin of RcGTA.
Appl Environ Microbiol. 2024 Sep 18;90(9):e0043424. doi: 10.1128/aem.00434-24. Epub 2024 Aug 27.
4
Identification of an Integrase That Responsible for Precise Integration and Excision of Genomic Island.
Front Microbiol. 2019 Sep 20;10:2099. doi: 10.3389/fmicb.2019.02099. eCollection 2019.
5
Peeping into genomic architecture by re-sequencing of Ochrobactrum intermedium M86 strain during laboratory adapted conditions.
Genom Data. 2016 Apr 19;8:72-6. doi: 10.1016/j.gdata.2016.04.003. eCollection 2016 Jun.
6
Characterization of the temperate phage vB_RleM_PPF1 and its site-specific integration into the Rhizobium leguminosarum F1 genome.
Mol Genet Genomics. 2016 Feb;291(1):349-62. doi: 10.1007/s00438-015-1113-8. Epub 2015 Sep 16.
7
Identification of tail genes in the temperate phage 16-3 of Sinorhizobium meliloti 41.
J Bacteriol. 2010 Mar;192(6):1617-23. doi: 10.1128/JB.01335-09. Epub 2010 Jan 15.
9
Identification of cohesive ends and genes encoding the terminase of phage 16-3.
J Bacteriol. 2005 Apr;187(7):2526-31. doi: 10.1128/JB.187.7.2526-2531.2005.
10
H protein of bacteriophage 16-3 and RkpM protein of Sinorhizobium meliloti 41 are involved in phage adsorption.
J Bacteriol. 2004 Mar;186(6):1591-7. doi: 10.1128/JB.186.6.1591-1597.2004.

本文引用的文献

1
Methods for Analysis of the C Cistron of Temperate Phage 16-3 of RHIZOBIUM MELILOTI.
Genetics. 1980 Feb;94(2):265-76. doi: 10.1093/genetics/94.2.265.
3
Host Ranges of the IncN Group Plasmid pCU1 and Its Minireplicon in Gram-Negative Purple Bacteria.
Appl Environ Microbiol. 1988 Sep;54(9):2273-6. doi: 10.1128/aem.54.9.2273-2276.1988.
4
Structure of the chromosomal insertion site for pSAM2: functional analysis in Escherichia coli.
Mol Microbiol. 1998 Apr;28(2):333-42. doi: 10.1046/j.1365-2958.1998.00799.x.
5
Site-specific integration of Agrobacterium T-DNA in Arabidopsis thaliana mediated by Cre recombinase.
Nucleic Acids Res. 1998 Jun 1;26(11):2729-34. doi: 10.1093/nar/26.11.2729.
6
Integrative promoter cloning plasmid vectors for Rhizobium meliloti.
FEMS Microbiol Lett. 1998 Feb 1;159(1):7-13. doi: 10.1111/j.1574-6968.1998.tb12834.x.
7
Similarities and differences among 105 members of the Int family of site-specific recombinases.
Nucleic Acids Res. 1998 Jan 15;26(2):391-406. doi: 10.1093/nar/26.2.391.
8
The integrase family of tyrosine recombinases: evolution of a conserved active site domain.
Nucleic Acids Res. 1997 Sep 15;25(18):3605-14. doi: 10.1093/nar/25.18.3605.
9
Molecular basis of symbiosis between Rhizobium and legumes.
Nature. 1997 May 22;387(6631):394-401. doi: 10.1038/387394a0.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验