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来自假单胞菌属菌株NRRLB - 12227的一种s - 三嗪环裂解酶的基因序列及特性

Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227.

作者信息

Karns J S

机构信息

USDA Agricultural Research Service, Natural Resources Institute, Soil Microbial Systems Laboratory, BARC-West, Beltsville, Maryland 20705-2350, USA.

出版信息

Appl Environ Microbiol. 1999 Aug;65(8):3512-7. doi: 10.1128/AEM.65.8.3512-3517.1999.

DOI:10.1128/AEM.65.8.3512-3517.1999
PMID:10427042
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC91527/
Abstract

Pesticides based on the s-triazine ring structure are widely used in cultivation of food crops. Cleavage of the s-triazine ring is an important step in the mineralization of s-triazine compounds and hence in their complete removal from the environment. Cyanuric acid amidohydrolase cleaves cyanuric acid (2,4,6-trihydroxy-s-triazine), which yields carbon dioxide and biuret; the biuret is subject to further metabolism, which yields CO(2) and ammonia. The trzD gene encoding cyanuric acid amidohydrolase was cloned into pMMB277 from Pseudomonas sp. strain NRRLB-12227, a strain that is capable of utilizing s-triazines as nitrogen sources. Hydrolysis of cyanuric acid was detected in crude extracts of Escherichia coli containing the cloned gene by monitoring the disappearance of cyanuric acid and the appearance of biuret by high-performance liquid chromatography (HPLC). DEAE and hydrophobic interaction HPLC were used to purify cyanuric acid amidohydrolase to homogeneity, and a spectrophotometric assay for the purified enzyme was developed. The purified enzyme had an apparent K(m) of 0.05 mM for cyanuric acid at pH 8.0. The enzyme did not cleave any other s-triazine or hydroxypyrimidine compound, although barbituric acid (2,4, 6-trihydroxypyrimidine) was found to be a strong competitive inhibitor. Neither the nucleotide sequence of trzD nor the amino acid sequence of the gene product exhibited a significant level of similarity to any known gene or protein.

摘要

基于s-三嗪环结构的农药广泛用于粮食作物种植。s-三嗪环的裂解是s-三嗪化合物矿化以及从环境中完全去除它们的重要步骤。氰尿酸酰胺水解酶可裂解氰尿酸(2,4,6-三羟基-s-三嗪),生成二氧化碳和缩二脲;缩二脲会进一步代谢,生成二氧化碳和氨。编码氰尿酸酰胺水解酶的trzD基因从假单胞菌属菌株NRRLB-12227克隆到pMMB277中,该菌株能够利用s-三嗪作为氮源。通过高效液相色谱法(HPLC)监测氰尿酸的消失和缩二脲的出现,在含有克隆基因的大肠杆菌粗提物中检测到氰尿酸的水解。使用DEAE和疏水相互作用HPLC将氰尿酸酰胺水解酶纯化至同质,并开发了一种用于纯化酶的分光光度测定法。纯化后的酶在pH 8.0时对氰尿酸的表观K(m)为0.05 mM。该酶不会裂解任何其他s-三嗪或羟基嘧啶化合物,尽管发现巴比妥酸(2,4,6-三羟基嘧啶)是一种强竞争性抑制剂。trzD的核苷酸序列和基因产物的氨基酸序列与任何已知基因或蛋白质均未表现出显著的相似性。

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本文引用的文献

1
Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.分离和鉴定一株能够矿化 s-三嗪类除草剂莠去津的假单胞菌。
Appl Environ Microbiol. 1995 Apr;61(4):1451-7. doi: 10.1128/aem.61.4.1451-1457.1995.
2
Molecular basis of a bacterial consortium: interspecies catabolism of atrazine.细菌联合体的分子基础:莠去津的种间降解作用。
Appl Environ Microbiol. 1998 Jan;64(1):178-84. doi: 10.1128/AEM.64.1.178-184.1998.
3
Purification and Characterization of an Inducible s-Triazine Hydrolase from Rhodococcus corallinus NRRL B-15444R.珊瑚诺卡氏菌 NRRL B-15444R 中诱导型三嗪水解酶的纯化和特性研究。
Appl Environ Microbiol. 1994 Feb;60(2):613-8. doi: 10.1128/aem.60.2.613-618.1994.
4
A COMPARISON OF ESTIMATES OF MICHAELIS-MENTEN KINETIC CONSTANTS FROM VARIOUS LINEAR TRANSFORMATIONS.基于各种线性变换的米氏动力学常数估计值比较
J Biol Chem. 1965 Feb;240:863-9.
5
AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolizing enzymes.AtzC是酰胺水解酶蛋白超家族的新成员,与其他阿特拉津代谢酶同源。
J Bacteriol. 1998 Jan;180(1):152-8. doi: 10.1128/JB.180.1.152-158.1998.
6
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.空位BLAST和位置特异性迭代BLAST:新一代蛋白质数据库搜索程序。
Nucleic Acids Res. 1997 Sep 1;25(17):3389-402. doi: 10.1093/nar/25.17.3389.
7
The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway.假单胞菌属菌株ADP的atzB基因编码一种新型莠去津降解途径的第二种酶。
Appl Environ Microbiol. 1997 Mar;63(3):916-23. doi: 10.1128/aem.63.3.916-923.1997.
8
Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization.来自假单胞菌属菌株ADP的阿特拉津氯水解酶:基因序列、酶的纯化及蛋白质特性分析
J Bacteriol. 1996 Aug;178(16):4894-900. doi: 10.1128/jb.178.16.4894-4900.1996.
9
Degradation and mineralization of atrazine by a soil bacterial isolate.一株土壤细菌分离株对阿特拉津的降解与矿化作用
Appl Environ Microbiol. 1995 Jan;61(1):297-302. doi: 10.1128/aem.61.1.297-302.1995.
10
Mineralization of the herbicide atrazine as a carbon source by a Pseudomonas strain.一株假单胞菌菌株以除草剂阿特拉津为碳源的矿化作用。
Appl Environ Microbiol. 1994 Dec;60(12):4297-302. doi: 10.1128/aem.60.12.4297-4302.1994.