Mack J W, Usha M G, Long J, Griffin R G, Wittebort R J
Department of Biochemistry and Molecular Biology, Howard University College of Medicine, Washington, DC, USA.
Biopolymers. 2000 Jan;53(1):9-18. doi: 10.1002/(SICI)1097-0282(200001)53:1<9::AID-BIP2>3.0.CO;2-6.
We have used 2H-nmr to study backbone dynamics of the 2H-labeled, slowly exchanging amide sites of fully hydrated, crystalline hen egg white lysozyme. Order parameters are determined from the residual quadrupole coupling and values increase from S2 = 0.85 at 290 K to S2 = 0.94 at 200 K. Dynamical rates are determined from spin-lattice relaxation at three nmr frequencies (38.8, 61.5, and 76.7 MHz). The approach used here is thus distinct from solution nmr studies where dynamical amplitudes and rates are both determined from relaxation measurements. At temperatures below 250 K, relaxation is independent of the nmr frequency indicating that backbone motions are fast compared to the nmr frequencies. However, as the temperature is increased above 250 K, relaxation is significantly more efficient at the lowest frequency, which shows, in addition, the presence of motions that are slow compared to the nmr frequencies. Using the values of S2 determined from the residual quadrupole coupling and a model-free relaxation formalism that allows for fast and slow internal motions, we conclude that these slow motions have correlation times in the range of 0.1 to 1.0 microsecond and are effectively frozen out at 250 K where fast motions of the amide planes with approximately 15 ps effective correlation times and 9 degrees rms amplitudes dominate relaxation. The fast internal motions increase slightly in amplitude as the temperature rises toward 290 K, but the correlation time, as is also observed in solution nmr studies of RNase H, is approximately constant. These findings are consistent with hypotheses of dynamic glass transitions in hydrated proteins arising from temperature-dependent damping of harmonic modes of motion above the transition point.
我们使用2H核磁共振来研究完全水合的结晶鸡蛋清溶菌酶中2H标记的、缓慢交换酰胺位点的主链动力学。通过残余四极耦合确定序参量,其值从290 K时的S2 = 0.85增加到200 K时的S2 = 0.94。动力学速率通过在三个核磁共振频率(38.8、61.5和76.7 MHz)下的自旋晶格弛豫来确定。因此,这里使用的方法与溶液核磁共振研究不同,在溶液核磁共振研究中,动力学振幅和速率均由弛豫测量确定。在低于250 K的温度下,弛豫与核磁共振频率无关,这表明主链运动比核磁共振频率快。然而,当温度升高到250 K以上时,在最低频率下弛豫效率显著更高,这还表明存在比核磁共振频率慢的运动。利用从残余四极耦合确定的S2值以及允许快速和慢速内部运动的无模型弛豫形式,我们得出结论,这些慢速运动的相关时间在0.1到1.0微秒范围内,并且在250 K时有效地冻结,此时酰胺平面的快速运动以约15皮秒的有效相关时间和9度的均方根振幅主导弛豫。随着温度升高到290 K,快速内部运动的振幅略有增加,但相关时间与核糖核酸酶H的溶液核磁共振研究中观察到的情况一样,大致保持恒定。这些发现与水合蛋白质中动态玻璃化转变的假设一致,该假设源于转变点以上运动谐波模式的温度依赖性阻尼。