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基于微生物种群波动计数估算其非周期性爆发的概率

On estimating the probability of aperiodic outbursts of microbial populations from their fluctuating counts.

作者信息

Peleg M, Horowitz J

机构信息

Chenoweth Laboratory, University of Massachusetts, Amherst 01003, USA.

出版信息

Bull Math Biol. 2000 Jan;62(1):17-35. doi: 10.1006/bulm.1999.0112.

Abstract

The irregular sequence of counts of a microbial population, in the absence of observable corresponding environmental changes (e.g., temperature), can be regarded as reflecting the interplay of several unknown or random factors that favor or inhibit growth. Since these factors tend to balance one another, the fluctuations usually remain within bounds, and only by a coincidence--when all or most act in unison--does an 'outburst' occur. This situation can be represented mathematically as a sequence of independent random variables governed by a probability distribution. The concept was applied to reported microbial counts of ground meat and wastewater. It is found that the lognormal distribution could serve as a model, and that simulations from this model are indistinguishable from actual records. The parameters of the lognormal (or other) distribution can then be used to estimate the probability of a population outburst, i.e., an increase above a given threshold. Direct estimation of the outburst probability based on frequency of occurrence is also possible, but in some situations requires an impractically large number of observations. We compare the efficiency of these two methods of estimation. Such methods enable translation of irregular records of microbial counts into actual probabilities of an outburst of a given magnitude. Thus, if the environment remains 'stable' or in dynamic equilibrium, the fluctuations should not be regarded merely as noise, but as a source of information and an indicator of potential population outbursts even where obvious signs do not exist.

摘要

在没有可观察到的相应环境变化(如温度)的情况下,微生物种群数量计数的不规则序列可被视为反映了有利于或抑制生长的几个未知或随机因素的相互作用。由于这些因素往往相互平衡,波动通常保持在一定范围内,只有在巧合的情况下——当所有或大多数因素一致作用时——才会发生“爆发”。这种情况可以用数学方式表示为受概率分布支配的独立随机变量序列。该概念应用于报道的碎肉和废水中的微生物计数。研究发现对数正态分布可以作为一个模型,并且从该模型进行的模拟与实际记录难以区分。然后,对数正态(或其他)分布的参数可用于估计种群爆发的概率,即超过给定阈值的增加。基于发生频率直接估计爆发概率也是可能的,但在某些情况下需要大量不切实际的观测。我们比较这两种估计方法的效率。这些方法能够将微生物计数的不规则记录转化为给定规模爆发的实际概率。因此,如果环境保持“稳定”或处于动态平衡,即使在没有明显迹象的情况下,波动也不应仅仅被视为噪声,而应被视为信息来源和潜在种群爆发的指标。

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