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注释真核生物基因组。

Annotating eukaryote genomes.

作者信息

Lewis S, Ashburner M, Reese M G

机构信息

Department of Molecular and Cell Biology, Berkeley Drosophila Genome Project, University of California, Berkeley, CA 94720-3200, USA.

出版信息

Curr Opin Struct Biol. 2000 Jun;10(3):349-54. doi: 10.1016/s0959-440x(00)00095-6.

Abstract

The Genome Annotation Assessment Project tested current methods of gene identification, including a critical assessment of the accuracy of different methods. Two new databases have provided new resources for gene annotation: these are the InterPro database of protein domains and motifs, and the Gene Ontology database for terms that describe the molecular functions and biological roles of gene products. Efforts in genome annotation are most often based upon advances in computer systems that are specifically designed to deal with the tremendous amounts of data being generated by current sequencing projects. These efforts in analysis are being linked to new ways of visualizing computationally annotated genomes.

摘要

基因组注释评估项目测试了当前的基因识别方法,包括对不同方法准确性的严格评估。两个新数据库为基因注释提供了新资源:一个是蛋白质结构域和基序的InterPro数据库,另一个是用于描述基因产物分子功能和生物学作用术语的基因本体论数据库。基因组注释工作通常基于专门设计用于处理当前测序项目产生的大量数据的计算机系统的进展。这些分析工作正与可视化经计算注释的基因组的新方法联系起来。

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