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本文引用的文献

1
Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake by in situ hybridization.利用原位杂交技术对高山湖泊冬季覆盖层和水层细菌组合进行群落分析。
Appl Environ Microbiol. 1996 Jun;62(6):2138-44. doi: 10.1128/aem.62.6.2138-2144.1996.
2
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.针对特定领域的探针EUB338不足以检测所有细菌：开发和评估一套更全面的探针组。
Syst Appl Microbiol. 1999 Sep;22(3):434-44. doi: 10.1016/S0723-2020(99)80053-8.
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Missing lithotroph identified as new planctomycete.缺失的化能无机营养菌被鉴定为新的浮霉菌门细菌。
Nature. 1999 Jul 29;400(6743):446-9. doi: 10.1038/22749.
4
Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.湖泊和海洋中的浮游细菌群落组成：基于荧光原位杂交的首次比较
Appl Environ Microbiol. 1999 Aug;65(8):3721-6. doi: 10.1128/AEM.65.8.3721-3726.1999.
5
Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia river, its estuary, and the adjacent coastal ocean.哥伦比亚河、河口及其邻近沿海水域中附着颗粒和自由生活细菌群落的系统发育分析。
Appl Environ Microbiol. 1999 Jul;65(7):3192-204. doi: 10.1128/AEM.65.7.3192-3204.1999.
6
Phylogenetic Composition, Spatial Structure, and Dynamics of Lotic Bacterial Biofilms Investigated by Fluorescent in Situ Hybridization and Confocal Laser Scanning Microscopy.通过荧光原位杂交和共聚焦激光扫描显微镜研究流水细菌生物膜的系统发育组成、空间结构和动态
Microb Ecol. 1999 May;37(4):225-237. doi: 10.1007/s002489900148.
7
Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes.监测一个广泛分布的细菌类群：使用靶向16S rRNA的探针原位检测浮霉菌门细菌
Microbiology (Reading). 1998 Dec;144 ( Pt 12):3257-3266. doi: 10.1099/00221287-144-12-3257.
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rRNA-targeted fluorescent in situ hybridization analysis of bacterial community structure in river water.河水细菌群落结构的rRNA靶向荧光原位杂交分析
Microbiology (Reading). 1998 Aug;144 ( Pt 8):2085-2093. doi: 10.1099/00221287-144-8-2085.
9
Isolation and characterization of phenol-degrading denitrifying bacteria.苯酚降解反硝化细菌的分离与鉴定
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Genomic complexity and plasticity of Burkholderia cepacia.洋葱伯克霍尔德菌的基因组复杂性与可塑性
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污染河流中的生物膜群落结构：完整年度周期内优势系统发育类群的丰度

Biofilm community structure in polluted rivers: abundance of dominant phylogenetic groups over a complete annual cycle.

作者信息

Brümmer I H, Fehr W, Wagner-Döbler I

机构信息

Division of Microbiology, National Research Centre for Biotechnology (GBF), D-38124 Braunschweig, Germany.

出版信息

Appl Environ Microbiol. 2000 Jul;66(7):3078-82. doi: 10.1128/AEM.66.7.3078-3082.2000.

DOI:10.1128/AEM.66.7.3078-3082.2000
PMID:10877809
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC92114/
Abstract

The seasonal dynamics of river biofilm communities in two German rivers, the Elbe and one of its tributaries, the Spittelwasser, were investigated for the first time by using fluorescence in situ hybridization and a standardized biofilm sampling procedure. We show the importance of members of the beta subclass of the class Proteobacteria, which formed the largest single group in the massively polluted Spittelwasser at all times. Clear seasonal peaks of abundance were observed for the planctomycetes and the Cytophaga-Flavobacterium cluster.

摘要

通过使用荧光原位杂交技术和标准化生物膜采样程序，首次对德国两条河流（易北河及其支流施皮特尔瓦瑟河）中河流生物膜群落的季节动态进行了研究。我们展示了变形菌门β亚类成员的重要性，它们在污染严重的施皮特尔瓦瑟河中始终构成最大的单一菌群。浮霉菌门和噬纤维菌-黄杆菌菌群出现了明显的丰度季节性峰值。