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抗酶表达:三联体解码的一种颠覆现象,这种现象在进化过程中显著保守,是一种自动调节回路的传感器。

Antizyme expression: a subversion of triplet decoding, which is remarkably conserved by evolution, is a sensor for an autoregulatory circuit.

作者信息

Ivanov I P, Gesteland R F, Atkins J F

机构信息

Department of Human Genetics, University of Utah, 15N 2030E, Room 7410, Salt Lake City, UT 84112-5330, USA.

出版信息

Nucleic Acids Res. 2000 Sep 1;28(17):3185-96. doi: 10.1093/nar/28.17.3185.

DOI:10.1093/nar/28.17.3185
PMID:10954585
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC110703/
Abstract

The efficiency of programmed ribosomal frameshifting in decoding antizyme mRNA is the sensor for an autoregulatory circuit that controls cellular polyamine levels in organisms ranging from the yeast Schizosaccharomyces pombe to Drosophila to mammals. Comparison of the frameshift sites and flanking stimulatory signals in many organisms now permits a reconstruction of the likely evolutionary path of the remarkably conserved mRNA sequences involved in the frameshifting.

摘要

在解码抗酶mRNA过程中,程序性核糖体移码的效率是一种自动调节回路的传感器,该回路控制着从粟酒裂殖酵母到果蝇再到哺乳动物等多种生物体中的细胞多胺水平。现在,对许多生物体中移码位点和侧翼刺激信号的比较,使得参与移码的高度保守的mRNA序列可能的进化路径得以重建。

相似文献

1
Antizyme expression: a subversion of triplet decoding, which is remarkably conserved by evolution, is a sensor for an autoregulatory circuit.抗酶表达:三联体解码的一种颠覆现象,这种现象在进化过程中显著保守,是一种自动调节回路的传感器。
Nucleic Acids Res. 2000 Sep 1;28(17):3185-96. doi: 10.1093/nar/28.17.3185.
2
A Nascent Peptide Signal Responsive to Endogenous Levels of Polyamines Acts to Stimulate Regulatory Frameshifting on Antizyme mRNA.一种对多胺内源性水平有反应的新生肽信号,可刺激抗酶mRNA上的调控移码。
J Biol Chem. 2015 Jul 17;290(29):17863-17878. doi: 10.1074/jbc.M115.647065. Epub 2015 May 21.
3
Programmed frameshifting in the synthesis of mammalian antizyme is +1 in mammals, predominantly +1 in fission yeast, but -2 in budding yeast.哺乳动物抗酶合成过程中的程序性移码在哺乳动物中为+1,在裂殖酵母中主要为+1,但在芽殖酵母中为-2。
RNA. 1998 Oct;4(10):1230-8. doi: 10.1017/s1355838298980864.
4
Polyamine sensing during antizyme mRNA programmed frameshifting.抗酶mRNA程序性移码过程中的多胺感知
Biochem Biophys Res Commun. 2005 Dec 23;338(3):1478-89. doi: 10.1016/j.bbrc.2005.10.115. Epub 2005 Oct 27.
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Polyamine sensing by nascent ornithine decarboxylase antizyme stimulates decoding of its mRNA.新生鸟氨酸脱羧酶抗酶通过多胺感应刺激其 mRNA 的解码。
Nature. 2011 Sep 7;477(7365):490-4. doi: 10.1038/nature10393.
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Ribosomal frameshifting in decoding antizyme mRNAs from yeast and protists to humans: close to 300 cases reveal remarkable diversity despite underlying conservation.从酵母、原生生物到人类的抗酶mRNA解码过程中的核糖体移码:近300个案例揭示了尽管存在潜在的保守性,但仍具有显著的多样性。
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Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme.哺乳动物鸟氨酸脱羧酶抗酶解码过程中的自动调节移码
Cell. 1995 Jan 13;80(1):51-60. doi: 10.1016/0092-8674(95)90450-6.
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Conservation of polyamine regulation by translational frameshifting from yeast to mammals.从酵母到哺乳动物,通过翻译移码对多胺调节的保守性。
EMBO J. 2000 Apr 17;19(8):1907-17. doi: 10.1093/emboj/19.8.1907.
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A sequence required for -1 ribosomal frameshifting located four kilobases downstream of the frameshift site.位于移码位点下游4千碱基处的-1核糖体移码所需序列。
J Mol Biol. 2001 Jul 27;310(5):987-99. doi: 10.1006/jmbi.2001.4801.
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Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.核糖体移码和转录滑动:从基因隐写术和密码学到偶然用途。
Nucleic Acids Res. 2016 Sep 6;44(15):7007-78. doi: 10.1093/nar/gkw530. Epub 2016 Jul 19.

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Statistical Methodology for Ribosomal Frameshift Detection.核糖体移码检测的统计方法
ACM BCB. 2022 Aug;2022. doi: 10.1145/3535508.3545529. Epub 2022 Aug 7.
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Biological Significance and Therapeutic Promise of Programmed Ribosomal Frameshifting.程序性核糖体移码的生物学意义与治疗前景
Int J Mol Sci. 2025 Feb 3;26(3):1294. doi: 10.3390/ijms26031294.
3
Ribosomal frameshifting at normal codon repeats recodes functional chimeric proteins in human.核糖体正常密码子重复移位导致人类功能性嵌合蛋白的重新编码。

本文引用的文献

1
A homolog of mammalian antizyme is present in fission yeast Schizosaccharomyces pombe but not detected in budding yeast Saccharomyces cerevisiae.哺乳动物抗酶的同源物存在于裂殖酵母粟酒裂殖酵母中,但在芽殖酵母酿酒酵母中未检测到。
Bioinformatics. 2000 May;16(5):478-81. doi: 10.1093/bioinformatics/16.5.478.
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One protein from two open reading frames: mechanism of a 50 nt translational bypass.来自两个开放阅读框的一种蛋白质:50个核苷酸翻译跳跃的机制
EMBO J. 2000 Jun 1;19(11):2671-80. doi: 10.1093/emboj/19.11.2671.
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Identification and characterization of testis specific ornithine decarboxylase antizyme (OAZ-t) gene: expression in haploid germ cells and polyamine-induced frameshifting.
Nucleic Acids Res. 2024 Mar 21;52(5):2463-2479. doi: 10.1093/nar/gkae035.
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The role of polyamine metabolism in remodeling immune responses and blocking therapy within the tumor immune microenvironment.多胺代谢在重塑免疫反应和阻断肿瘤免疫微环境中的治疗作用。
Front Immunol. 2022 Sep 2;13:912279. doi: 10.3389/fimmu.2022.912279. eCollection 2022.
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Phenotypic mutations contribute to protein diversity and shape protein evolution.表型突变有助于蛋白质多样性,并塑造蛋白质进化。
Protein Sci. 2022 Sep;31(9):e4397. doi: 10.1002/pro.4397.
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Correction of frameshift mutations in the atpB gene by translational recoding in chloroplasts of Oenothera and tobacco.叶绿体中 atpB 基因移码突变的翻译校正:Oenothera 和烟草的研究。
Plant Cell. 2021 Jul 2;33(5):1682-1705. doi: 10.1093/plcell/koab050.
7
Critical Factors in Human Antizymes that Determine the Differential Binding, Inhibition, and Degradation of Human Ornithine Decarboxylase.影响人抗酶差异性结合、抑制和降解鸟氨酸脱羧酶的关键因素。
Biomolecules. 2019 Dec 12;9(12):864. doi: 10.3390/biom9120864.
8
Translational recoding signals: Expanding the synthetic biology toolbox.翻译后文本:翻译重编码信号:拓展合成生物学工具包。
J Biol Chem. 2019 May 10;294(19):7537-7545. doi: 10.1074/jbc.REV119.006348. Epub 2019 Apr 1.
9
The antizyme family for regulating polyamines.调控多胺的抗酶家族。
J Biol Chem. 2018 Nov 30;293(48):18730-18735. doi: 10.1074/jbc.TM118.003339. Epub 2018 Oct 24.
10
Roles of polyamines in translation.多胺在翻译中的作用。
J Biol Chem. 2018 Nov 30;293(48):18719-18729. doi: 10.1074/jbc.TM118.003338. Epub 2018 Oct 15.
睾丸特异性鸟氨酸脱羧酶抗酶(OAZ-t)基因的鉴定与表征:在单倍体生殖细胞中的表达及多胺诱导的移码
Genes Cells. 2000 Apr;5(4):265-76. doi: 10.1046/j.1365-2443.2000.00324.x.
4
Complementarity between the mRNA 5' untranslated region and 18S ribosomal RNA can inhibit translation.信使核糖核酸5′非翻译区与18S核糖体核糖核酸之间的互补性可抑制翻译。
RNA. 2000 Apr;6(4):584-97. doi: 10.1017/s1355838200992239.
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Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: antizyme 3.精子发生阶段特异性鸟氨酸脱羧酶抗酶的发现:抗酶3
Proc Natl Acad Sci U S A. 2000 Apr 25;97(9):4808-13. doi: 10.1073/pnas.070055897.
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Conservation of polyamine regulation by translational frameshifting from yeast to mammals.从酵母到哺乳动物,通过翻译移码对多胺调节的保守性。
EMBO J. 2000 Apr 17;19(8):1907-17. doi: 10.1093/emboj/19.8.1907.
7
Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting.参与刺激核糖体移码的RNA假结的结构、稳定性和功能
J Mol Biol. 2000 Apr 28;298(2):167-85. doi: 10.1006/jmbi.2000.3668.
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Properties of a polyamine transporter regulated by antizyme.一种受抗酶调节的多胺转运体的特性
Biochem J. 2000 Apr 1;347 Pt 1(Pt 1):297-303.
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Translational frameshifting: implications for the mechanism of translational frame maintenance.翻译移码:对翻译框架维持机制的影响。
Prog Nucleic Acid Res Mol Biol. 2000;64:131-70. doi: 10.1016/s0079-6603(00)64004-7.
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Translation by ribosome shunting on adenovirus and hsp70 mRNAs facilitated by complementarity to 18S rRNA.腺病毒和热休克蛋白70(hsp70)信使核糖核酸(mRNA)上通过核糖体跳跃进行的翻译,因与18S核糖体核糖核酸(rRNA)互补而得以促进。
Genes Dev. 2000 Feb 15;14(4):414-21.