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用于同时检测大蛋白质中主链15N-1H、芳香族13C-1H和侧链15N-1H2相关性的[15N,1H]/[13C,1H]-TROSY

[15N,1H]/[13C,1H]-TROSY for simultaneous detection of backbone 15N-1H, aromatic 13C-1H and side-chain 15N-1H2 correlations in large proteins.

作者信息

Pervushin K, Braun D, Fernández C, Wüthrich K

机构信息

Institut für Molekularbiologie und Biophysik, Eidgenössische Technische Hochschule Hönggerberg, Zürich, Switzerland.

出版信息

J Biomol NMR. 2000 Jul;17(3):195-202. doi: 10.1023/a:1008399320576.

Abstract

This paper describes a [15N,1H]/[13C,1H]-TROSY experiment for the simultaneous acquisition of the heteronuclear chemical shift correlations of backbone amide 15N-1H groups, side chain 15N-1H2 groups and aromatic 13C-1H groups in otherwise highly deuterated proteins. The 15N-1H and 13C-1H correlations are extracted from two subspectra of the same data set, thus preventing possible spectral overlap of aromatic and amide protons in the 1H dimension. The side-chain 15N-1H2 groups, which are suppressed in conventional [15N,1H)-TROSY, are observed with high sensitivity in the 15N-1H subspectrum. [15N,1H]/[13C,1H]-TROSY was used as the heteronuclear correlation block in a 3D [1H,1H]-NOESY-[15N,1H]/[13C,1H]-TROSY experiment with the membrane protein OmpA reconstituted in detergent micelles of molecular weight 80000 Da, which enabled the detection of numerous NOEs between backbone amide protons and both aromatic protons and side chain 15N-1H2 groups.

摘要

本文描述了一种[15N,1H]/[13C,1H]-TROSY实验,用于在高度氘代的蛋白质中同时获取主链酰胺15N-1H基团、侧链15N-1H2基团和芳香族13C-1H基团的异核化学位移相关性。15N-1H和13C-1H相关性是从同一数据集的两个子谱中提取的,从而避免了1H维度中芳香族质子和酰胺质子可能的谱重叠。在传统的[15N,1H]-TROSY中被抑制的侧链15N-1H2基团,在15N-1H子谱中具有高灵敏度的观测。[15N,1H]/[13C,1H]-TROSY被用作三维[1H,1H]-NOESY-[15N,1H]/[13C,1H]-TROSY实验中的异核相关模块,该实验中膜蛋白OmpA重构于分子量为80000 Da的去污剂胶束中,这使得能够检测到主链酰胺质子与芳香族质子和侧链15N-1H2基团之间的大量核Overhauser效应(NOE)。

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