Denner E B, Mark B, Busse H J, Turkiewicz M, Lubitz W
Institut für Mikrobiologie und Genetik, Universität Wien, Vienna Biocenter, Wien, Austria.
Syst Appl Microbiol. 2001 Apr;24(1):44-53. doi: 10.1078/0723-2020-00006.
An Antarctic marine bacterium (strain 116) excreting an extracellular cold-adapted metalloprotease was subjected to a detailed polyphasic taxonomic investigation. Strain 116 was previously isolated from the stomach of a specimen of the Antarctic krill Euphasia superba Dana and tentatively characterized as Sphingomonas paucimobilis 116. The 16S rDNA sequence analysis showed that the strain is in fact related to species of the genus Psychrobacter, next to Psychrobacter glacincola (97.4% similarity). Sequence similarities between strain 116 and other Psychrobacter species ranged from 96.9% (with P. urativorans) to 95.4% (with P. immobilis). Key phenotypic characteristics as well as chemotaxonomic features of the bacterium were congruent with the description of the genus Psychrobacter i.e. cells were strictly aerobic, strongly oxidase-positive, psychrotrophic, halotolerant, gram-negative non-motile coccobacilli, with ubiquinone-8 as the main respiratory lipoquinone and 18:1 cis 9, 16:1 cis and 17:1 (omega8c being the predominant cellular fatty acids. The G+C content of the DNA was 43.6 mol%. DNA-DNA hybridization studies showed that the relatedness between strain 116 and Psychrobacter glacinola is only 62.2%. Further differences were apparent in whole-cell SDS-PAGE protein pattern, cellular fatty acid profile and in a number of physiological and biochemical characteristics as well as in enzymatic activities. Tolerance to 5% bile salts, nitrate reduction, citrate utilization, acid production from carbohydrates, alkaline phosphatase, acid phosphatase, C4 esterase, C14 lipase and valine arylamidase were found to differentiate strain 116 from Psychrobacter glacincola. On the basis of this phenotypic and molecular evidences, strain 116, previously known as Sphingomonas paucimobilis 116, was recognized as a new species of the genus Psychrobacter for which the name Psychrobacter proteolyticus is proposed. Strain 116 has been deposited in the Collection de l'Institut Pasteur, France, as CIP106830T and in the Deutsche Sammlung von Mikroorganismen and Zellkulturen, as DSM13887.
对一株分泌胞外冷适应金属蛋白酶的南极海洋细菌(菌株116)进行了详细的多相分类学研究。菌株116先前从南极磷虾(Euphasia superba Dana)标本的胃中分离得到,初步鉴定为少动鞘氨醇单胞菌(Sphingomonas paucimobilis)116。16S rDNA序列分析表明,该菌株实际上与嗜冷杆菌属(Psychrobacter)的物种相关,仅次于嗜冷嗜冷杆菌(Psychrobacter glacincola)(相似性为97.4%)。菌株116与其他嗜冷杆菌属物种之间的序列相似性范围为96.9%(与食尿嗜冷杆菌(P. urativorans))至95.4%(与嗜冷嗜冷杆菌(P. immobilis))。该细菌的关键表型特征以及化学分类特征与嗜冷杆菌属的描述一致,即细胞严格需氧,氧化酶强阳性,嗜冷,耐盐,革兰氏阴性无运动性的球杆菌,以泛醌-8作为主要呼吸脂醌,18:1顺式9、16:1顺式和17:1(ω8c为主要细胞脂肪酸)。DNA的G+C含量为43.6 mol%。DNA-DNA杂交研究表明,菌株116与嗜冷嗜冷杆菌之间的相关性仅为62.2%。在全细胞SDS-PAGE蛋白质图谱、细胞脂肪酸谱以及一些生理和生化特征以及酶活性方面也存在明显差异。发现对5%胆盐的耐受性、硝酸盐还原、柠檬酸盐利用、碳水化合物产酸、碱性磷酸酶、酸性磷酸酶、C4酯酶、C14脂肪酶和缬氨酸芳基酰胺酶可将菌株116与嗜冷嗜冷杆菌区分开来。基于这些表型和分子证据,先前称为少动鞘氨醇单胞菌116的菌株116被确认为嗜冷杆菌属的一个新物种,为此提出了嗜冷蛋白水解杆菌(Psychrobacter proteolyticus)的名称。菌株116已保藏于法国巴斯德研究所菌种保藏中心,保藏编号为CIP106830T,以及德国微生物和细胞培养物保藏中心,保藏编号为DSM13887。