Benítez-Cardoza C G, Rojo-Domínguez A, Hernández-Arana A
Area de Biofisicoquímica, Departamento de Química, Universidad Autónoma Metropolitana-Iztapalapa, Apartado Postal 55-534, Iztapalapa D.F. 09340, Mexico.
Biochemistry. 2001 Jul 31;40(30):9049-58. doi: 10.1021/bi010528w.
The thermal denaturation of the dimeric enzyme triosephosphate isomerase (TIM) from Saccharomyces cerevisiae was studied by spectroscopic and calorimetric methods. At low protein concentration the structural transition proved to be reversible in thermal scannings conducted at a rate greater than 1.0 degrees C min(-1). Under these conditions, however, the denaturation-renaturation cycle exhibited marked hysteresis. The use of lower scanning rates lead to pronounced irreversibility. Kinetic studies indicated that denaturation of the enzyme likely consists of an initial first-order reaction that forms thermally unfolded (U) TIM, followed by irreversibility-inducing reactions which are probably linked to aggregation of the unfolded protein. As judged from CD measurements, U possesses residual secondary structure but lacks most of the tertiary interactions present in native TIM. Furthermore, the large increment in heat capacity upon denaturation suggests that extensive exposure of surface area occurs when U is formed. Above 63 degrees C, reactions leading to irreversibility were much slower than the unfolding process; as a result, U was sufficiently long-lived as to allow an investigation of its refolding kinetics. We found that U transforms into nativelike TIM through a second-order reaction in which association is coupled to the regain of secondary structure. The rate constants for unfolding and refolding of TIM displayed temperature dependences resembling those reported for monomeric proteins but with considerably larger activation enthalpies. Such large temperature dependences seem to be determinant for the occurrence of kinetically controlled transitions and thus constitute a simple explanation for the hysteresis observed in thermal scannings.
通过光谱和量热法研究了酿酒酵母中双聚体酶磷酸丙糖异构酶(TIM)的热变性。在低蛋白浓度下,在以大于1.0℃/分钟的速率进行的热扫描中,结构转变被证明是可逆的。然而,在这些条件下,变性-复性循环表现出明显的滞后现象。使用较低的扫描速率会导致明显的不可逆性。动力学研究表明,该酶的变性可能由一个初始的一级反应组成,该反应形成热解折叠的(U)TIM,随后是导致不可逆性的反应,这些反应可能与解折叠蛋白的聚集有关。从圆二色性测量判断,U具有残余二级结构,但缺乏天然TIM中存在的大部分三级相互作用。此外,变性时热容量的大幅增加表明,形成U时会发生广泛的表面积暴露。在63℃以上,导致不可逆性的反应比解折叠过程慢得多;因此,U的寿命足够长,以便研究其重折叠动力学。我们发现,U通过二级反应转化为类似天然的TIM,其中缔合与二级结构的恢复相耦合。TIM解折叠和重折叠的速率常数显示出与报道的单体蛋白相似的温度依赖性,但具有相当大的活化焓。如此大的温度依赖性似乎是动力学控制转变发生的决定因素,因此构成了热扫描中观察到的滞后现象的一个简单解释。