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二甲基砜代谢酶以及兼性甲基营养菌嗜硫节杆菌新种、嗜甲基节杆菌新种和嗜硫生丝微菌新种的系统发育特征

Enzymes of dimethylsulfone metabolism and the phylogenetic characterization of the facultative methylotrophs Arthrobacter sulfonivorans sp. nov., Arthrobacter methylotrophus sp. nov., and Hyphomicrobium sulfonivorans sp. nov.

作者信息

Borodina Elena, Kelly Donovan P, Schumann Peter, Rainey Frederick A, Ward-Rainey Naomi L, Wood Ann P

机构信息

Division of Life Sciences, King's College London, UK.

出版信息

Arch Microbiol. 2002 Feb;177(2):173-83. doi: 10.1007/s00203-001-0373-3. Epub 2001 Dec 4.

Abstract

Novel methylotrophic Arthrobacter and Hyphomicrobium species are described. Constitutive membrane-associated dimethylsulfone- and dimethylsulfoxide-reductases were found in Arthrobacter methylotrophus strain TGA and Hyphomicrobium sulfonivorans strain S1. Enzyme activities increased during growth with dimethylsulfone or dimethylsulfoxide, respectively, and different ratios of activity with different growth substrates indicated that they are separate enzymes. SDS-PAGE showed some membrane-associated polypeptides to be enhanced during growth with dimethylsulfone (54 kDa in H. sulfonivorans, 21-24 kDa, 54 kDa and 80 kDa in A. methylotrophus). Western blotting with anti-dimethylsulfoxide-reductase antibody showed cross-reaction with 54- and 21-kDa polypeptides in A. methylotrophus. All strains contained rhodanese and sulfur oxygenase after growth with dimethylsulfone. Sulfite was oxidized in the Arthrobacter species by APS reductase and sulfite dehydrogenase. H. sulfonivorans oxidized sulfite with APS reductase, which is unusual for an alpha-proteobacterium. The Arthrobacter species were distinguished from each other and from other Arthrobacter and Micrococcus species by 16S rRNA gene sequence analysis. The menaquinone and fatty acid profiles of the Arthrobacter species were similar. Their peptidoglycan structures were L-Lys- L-Ser- L-Thr- L-Ala for A. sulfonivorans and L-Lys- L-Ala(2-4) for A. methylotrophus. H. sulfonivorans exhibited gross morphology typical for Hyphomicrobium, but possessed helically twisted prosthecae. 16S rRNA gene sequence analysis showed it to be distinct from all the other Hyphomicrobium, Filomicrobium and Pedomicrobium species sequenced to date. Formal descriptions of the new species are given.

摘要

描述了新型甲基营养型节杆菌属和生丝微菌属物种。在嗜甲基节杆菌菌株TGA和食亚砜生丝微菌菌株S1中发现了组成型膜相关二甲基砜和二甲基亚砜还原酶。酶活性分别在以二甲基砜或二甲基亚砜生长期间增加,并且不同生长底物的活性比例不同表明它们是不同的酶。SDS-PAGE显示一些膜相关多肽在以二甲基砜生长期间增强(食亚砜生丝微菌中为54 kDa,嗜甲基节杆菌中为21 - 24 kDa、54 kDa和80 kDa)。用抗二甲基亚砜还原酶抗体进行的蛋白质免疫印迹显示与嗜甲基节杆菌中的54 kDa和21 kDa多肽有交叉反应。所有菌株在以二甲基砜生长后都含有硫氰酸酶和硫氧化酶。节杆菌属物种中的亚硫酸盐通过APS还原酶和亚硫酸盐脱氢酶氧化。食亚砜生丝微菌用APS还原酶氧化亚硫酸盐,这对于α-变形菌来说是不寻常的。通过16S rRNA基因序列分析将节杆菌属物种彼此区分开,并与其他节杆菌属和微球菌属物种区分开。节杆菌属物种的甲基萘醌和脂肪酸谱相似。它们的肽聚糖结构对于食亚砜节杆菌是L-赖氨酸-L-丝氨酸-L-苏氨酸-L-丙氨酸,对于嗜甲基节杆菌是L-赖氨酸-L-丙氨酸(2 - 4)。食亚砜生丝微菌表现出生丝微菌典型的总体形态,但具有螺旋扭曲的柄。16S rRNA基因序列分析表明它与迄今为止测序的所有其他生丝微菌属、丝发菌属和柄杆菌属物种不同。给出了新物种的正式描述。

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