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[用于分子流行病学研究的狂犬病病毒基因组扩增标准化]

[Standardization of rabies virus genome amplification for its use in molecular epidemiology studies].

作者信息

Páez Andrés, García Clemencia, Boshell Jorge

机构信息

Laboratorio de Virología, Instituto Nacional de Salud, Bogotá, D.C., Colombia.

出版信息

Biomedica. 2002 Mar;22(1):71-5.

Abstract

In order to improve the diagnosis and typification of rabies viruses at the Instituto Nacional de Salud National Reference Laboratory for rabies, we standardized techniques for the amplification of a 902 nucleotide DNA fragment, complementary to a selected region of the rabies virus genomic RNA. This region codes for a segment of both the glycoprotein and protein L, and contains the G-L intergenic noncoding region known as Pseudogen Psi. The standardized techniques included: 1) biological amplification of rabies viruses by intracerebral mouse inoculation; 2) total RNA extraction from the brains of infected mice, 3) RT-PCR amplification of a 902 nucleotide DNA fragment complementary to the selected RNA region. The study sample consisted of 30 rabies virus strains isolated from dogs and selected from the virus bank of the Virology Laboratory. Due to their simplicity the methods described have several advantages when compared to methods reported in previous papers. The technology proposed is a precise complement to rabies diagnosis techniques, and can be applied to the identification of phylogenetic relations among rabies isolates, and, therefore, it is also used to identify rabies transmission dynamics and geographical distribution.

摘要

为了改进国家卫生研究所狂犬病国家参考实验室对狂犬病病毒的诊断和分型,我们对一段902个核苷酸的DNA片段的扩增技术进行了标准化,该片段与狂犬病病毒基因组RNA的选定区域互补。该区域编码糖蛋白和L蛋白的一个片段,并包含称为假基因Psi的G-L基因间非编码区域。标准化技术包括:1)通过脑内接种小鼠对狂犬病病毒进行生物学扩增;2)从感染小鼠的大脑中提取总RNA;3)对与选定RNA区域互补的902个核苷酸DNA片段进行RT-PCR扩增。研究样本包括从狗身上分离出的30株狂犬病病毒株,这些病毒株是从病毒学实验室的病毒库中挑选出来的。与以前论文中报道的方法相比,所述方法由于其简单性而具有几个优点。所提出的技术是狂犬病诊断技术的精确补充,可用于鉴定狂犬病分离株之间的系统发育关系,因此,它也用于确定狂犬病的传播动态和地理分布。

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